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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
KRLQFNETLSKLILGGLRLRGISNSITDYQKLYKITFDAAEFTHRDELKRISMGSGEEVS
FESLQETVETLLKLFTK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3x38-a2-m1-cC 79 77 1.0000 0.9747 1.0000 1.46e-50 3x38-a2-m1-cD_3x38-a2-m1-cC
2 3x38-a2-m1-cD 77 77 1.0000 1.0000 1.0000 1.63e-50 3x38-a2-m1-cD_3x38-a2-m1-cC
3 6kni-a1-m1-cB 381 61 0.2468 0.0499 0.3115 2.2 6kni-a1-m1-cA_6kni-a1-m1-cB
4 6kni-a1-m1-cA 381 61 0.2468 0.0499 0.3115 2.2 6kni-a1-m1-cA_6kni-a1-m1-cB
5 8ewy-a1-m1-cB 1049 51 0.2208 0.0162 0.3333 3.6 8ewy-a1-m1-cA_8ewy-a1-m1-cB
6 8ewy-a1-m1-cA 1049 51 0.2208 0.0162 0.3333 3.6 8ewy-a1-m1-cA_8ewy-a1-m1-cB
7 7t6f-a1-m1-cB 1045 51 0.2208 0.0163 0.3333 3.6 7t6f-a1-m1-cA_7t6f-a1-m1-cB
8 7t6f-a1-m1-cA 1045 51 0.2208 0.0163 0.3333 3.6 7t6f-a1-m1-cA_7t6f-a1-m1-cB
9 4ruq-a1-m1-cA 236 30 0.1688 0.0551 0.4333 4.6 4ruq-a1-m1-cA_4ruq-a1-m1-cB
10 4ruq-a1-m1-cB 237 30 0.1688 0.0549 0.4333 4.6 4ruq-a1-m1-cA_4ruq-a1-m1-cB
11 4fin-a1-m1-cB 518 34 0.1558 0.0232 0.3529 5.4 4fin-a1-m1-cB_4fin-a1-m1-cA
12 4fin-a1-m1-cA 528 34 0.1558 0.0227 0.3529 5.5 4fin-a1-m1-cB_4fin-a1-m1-cA
13 4l00-a3-m1-cB 278 51 0.2078 0.0576 0.3137 5.7 4l00-a3-m1-cA_4l00-a3-m1-cB
14 1vhk-a3-m1-cA 231 33 0.1299 0.0433 0.3030 6.0 1vhk-a3-m1-cB_1vhk-a3-m1-cA
15 4efc-a5-m2-cB 450 37 0.1688 0.0289 0.3514 7.9 4efc-a5-m1-cB_4efc-a5-m2-cB
16 4efc-a5-m1-cB 450 37 0.1688 0.0289 0.3514 7.9 4efc-a5-m1-cB_4efc-a5-m2-cB
17 4efc-a3-m1-cB 450 37 0.1688 0.0289 0.3514 7.9 4efc-a3-m1-cB_4efc-a3-m2-cA
18 4efc-a2-m1-cB 450 37 0.1688 0.0289 0.3514 7.9 4efc-a2-m1-cB_4efc-a2-m1-cA
19 5lp3-a1-m1-cD 373 29 0.1558 0.0322 0.4138 8.0 5lp3-a1-m1-cD_5lp3-a1-m1-cL
20 2aqv-a1-m4-cB 374 29 0.1558 0.0321 0.4138 8.0 2aqv-a1-m1-cA_2aqv-a1-m4-cB, 2aqv-a1-m2-cB_2aqv-a1-m4-cB, 2aqv-a1-m4-cA_2aqv-a1-m4-cB
21 2aqv-a1-m2-cB 374 29 0.1558 0.0321 0.4138 8.0 2aqv-a1-m2-cB_2aqv-a1-m4-cB
22 4efc-a3-m2-cA 452 37 0.1688 0.0288 0.3514 8.2 4efc-a3-m1-cB_4efc-a3-m2-cA
23 4efc-a2-m1-cA 452 37 0.1688 0.0288 0.3514 8.2 4efc-a2-m1-cB_4efc-a2-m1-cA
24 7tm0-a1-m1-cB 1015 33 0.1818 0.0138 0.4242 8.4 7tm0-a1-m1-cB_7tm0-a1-m1-cA
25 7tm0-a1-m1-cA 1016 33 0.1818 0.0138 0.4242 8.4 7tm0-a1-m1-cB_7tm0-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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