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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
KRVCRFCLTEQKLASIFEENPRVKTTANLPLQIMAITAIEVYAGDGMPGHICLECRLLFE
HCYRFKQMCKRAETLLRQYPLTGNWPSPLEKPRAPISS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7pok-a1-m1-cA 98 98 1.0000 1.0000 1.0000 1.27e-70 7pok-a1-m1-cD_7pok-a1-m1-cA
2 7pok-a1-m1-cD 90 95 0.9184 1.0000 0.9474 6.44e-62 7pok-a1-m1-cD_7pok-a1-m1-cA, 7pok-a1-m1-cD_7pok-a1-m1-cB
3 7pok-a1-m1-cB 93 95 0.9082 0.9570 0.9368 3.71e-61 7pok-a1-m1-cD_7pok-a1-m1-cB
4 1y1u-a2-m2-cC 544 61 0.1939 0.0349 0.3115 0.64 1y1u-a2-m1-cC_1y1u-a2-m2-cC
5 1y1u-a2-m1-cC 544 61 0.1939 0.0349 0.3115 0.64 1y1u-a2-m1-cC_1y1u-a2-m2-cC
6 6lpw-a1-m1-cB 436 71 0.1939 0.0436 0.2676 1.1 6lpw-a1-m2-cA_6lpw-a1-m1-cB
7 6lpw-a1-m2-cA 431 71 0.1939 0.0441 0.2676 1.2 6lpw-a1-m2-cA_6lpw-a1-m1-cB
8 6fp5-a1-m1-cB 86 80 0.2041 0.2326 0.2500 3.2 6fp5-a1-m1-cA_6fp5-a1-m1-cB
9 6fp5-a1-m1-cA 84 80 0.2041 0.2381 0.2500 4.5 6fp5-a1-m1-cA_6fp5-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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