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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
KRVCRFCLTEQKLASIFEETTANLPLQIMAITAIEVYAGDGMPGHICLECRLLFEHCYRF
KQMCKRAETLLRQYPLTGNWPSPLEKPRAP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7pok-a1-m1-cD 90 90 1.0000 1.0000 1.0000 3.52e-64 7pok-a1-m1-cD_7pok-a1-m1-cA, 7pok-a1-m1-cD_7pok-a1-m1-cB
2 7pok-a1-m1-cA 98 95 1.0000 0.9184 0.9474 5.92e-62 7pok-a1-m1-cD_7pok-a1-m1-cA
3 7pok-a1-m1-cB 93 90 0.9889 0.9570 0.9889 9.57e-62 7pok-a1-m1-cD_7pok-a1-m1-cB
4 1y1u-a2-m2-cC 544 54 0.2000 0.0331 0.3333 1.0 1y1u-a2-m1-cC_1y1u-a2-m2-cC
5 1y1u-a2-m1-cC 544 54 0.2000 0.0331 0.3333 1.0 1y1u-a2-m1-cC_1y1u-a2-m2-cC
6 6lpw-a1-m1-cB 436 37 0.1444 0.0298 0.3514 1.7 6lpw-a1-m2-cA_6lpw-a1-m1-cB
7 6lpw-a1-m2-cA 431 37 0.1444 0.0302 0.3514 1.8 6lpw-a1-m2-cA_6lpw-a1-m1-cB
8 7po9-a1-m1-cA 88 71 0.1667 0.1705 0.2113 4.2 7po9-a1-m1-cB_7po9-a1-m1-cA
9 2q4o-a1-m1-cB 170 39 0.1111 0.0588 0.2564 4.7 2q4o-a1-m1-cA_2q4o-a1-m1-cB
10 2q4o-a1-m1-cA 170 39 0.1111 0.0588 0.2564 5.0 2q4o-a1-m1-cA_2q4o-a1-m1-cB
11 7po9-a1-m1-cB 84 67 0.1556 0.1667 0.2090 5.2 7po9-a1-m1-cB_7po9-a1-m1-cA
12 6fp5-a1-m1-cB 86 80 0.2111 0.2209 0.2375 8.3 6fp5-a1-m1-cA_6fp5-a1-m1-cB
13 5yo9-a1-m1-cB 366 30 0.1333 0.0328 0.4000 9.2 5yo9-a1-m1-cB_5yo9-a1-m1-cA
14 5yo9-a1-m1-cA 371 30 0.1333 0.0323 0.4000 9.2 5yo9-a1-m1-cB_5yo9-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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