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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
KSCCPNTTGRDIYNTCRLGGGSRERCASLSGCKIISASTCPSDYPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2v9b-a1-m1-cB 46 46 1.0000 1.0000 1.0000 1.13e-27 2v9b-a1-m1-cA_2v9b-a1-m1-cB
2 2v9b-a1-m1-cA 46 46 1.0000 1.0000 1.0000 1.13e-27 2v9b-a1-m1-cA_2v9b-a1-m1-cB
3 3c8p-a1-m1-cB 46 46 0.8478 0.8478 0.8478 2.05e-22 3c8p-a1-m1-cA_3c8p-a1-m1-cB
4 3c8p-a1-m1-cA 46 46 0.8478 0.8478 0.8478 2.05e-22 3c8p-a1-m1-cA_3c8p-a1-m1-cB
5 1okh-a1-m1-cB 46 46 0.8043 0.8043 0.8043 8.13e-21 1okh-a1-m1-cA_1okh-a1-m1-cB
6 1okh-a1-m1-cA 46 46 0.8043 0.8043 0.8043 8.13e-21 1okh-a1-m1-cA_1okh-a1-m1-cB
7 1bhp-a1-m4-cA 45 46 0.4783 0.4889 0.4783 6.37e-09 1bhp-a1-m3-cA_1bhp-a1-m4-cA
8 1bhp-a1-m3-cA 45 46 0.4783 0.4889 0.4783 6.37e-09 1bhp-a1-m3-cA_1bhp-a1-m4-cA
9 1wuw-a1-m1-cB 45 46 0.4783 0.4889 0.4783 9.70e-08 1wuw-a1-m1-cA_1wuw-a1-m1-cB
10 1wuw-a1-m1-cA 45 46 0.4783 0.4889 0.4783 9.70e-08 1wuw-a1-m1-cA_1wuw-a1-m1-cB
11 2plh-a1-m4-cA 45 46 0.4783 0.4889 0.4783 2.41e-07 2plh-a1-m3-cA_2plh-a1-m4-cA
12 2plh-a1-m3-cA 45 46 0.4783 0.4889 0.4783 2.41e-07 2plh-a1-m3-cA_2plh-a1-m4-cA
13 1yb4-a1-m2-cB 280 20 0.2174 0.0357 0.5000 4.0 1yb4-a1-m1-cA_1yb4-a1-m2-cB, 1yb4-a1-m1-cB_1yb4-a1-m2-cB, 1yb4-a1-m2-cA_1yb4-a1-m2-cB
14 1yb4-a1-m2-cA 280 20 0.2174 0.0357 0.5000 4.0 1yb4-a1-m2-cA_1yb4-a1-m2-cB
15 1yb4-a1-m1-cB 280 20 0.2174 0.0357 0.5000 4.0 1yb4-a1-m1-cB_1yb4-a1-m2-cB
16 1yb4-a1-m1-cA 280 20 0.2174 0.0357 0.5000 4.0 1yb4-a1-m1-cA_1yb4-a1-m2-cB
17 3ig6-a3-m2-cD 243 18 0.2174 0.0412 0.5556 4.1 3ig6-a3-m2-cD_3ig6-a3-m1-cB
18 3ig6-a3-m2-cB 245 18 0.2174 0.0408 0.5556 4.1 3ig6-a3-m2-cB_3ig6-a3-m1-cB
19 3ig6-a3-m1-cB 245 18 0.2174 0.0408 0.5556 4.1 3ig6-a3-m2-cB_3ig6-a3-m1-cB, 3ig6-a3-m2-cD_3ig6-a3-m1-cB
20 4zkr-a1-m1-cU 246 18 0.2174 0.0407 0.5556 4.2 4zkr-a1-m1-cP_4zkr-a1-m1-cU

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Reference:
Jacob Schwartz et al.

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