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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
KSCCPSTTGRNIYNTCRLTGSSRETCAKLSGCKIISASTCPSNYPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3c8p-a1-m1-cB 46 46 1.0000 1.0000 1.0000 7.97e-27 3c8p-a1-m1-cA_3c8p-a1-m1-cB
2 3c8p-a1-m1-cA 46 46 1.0000 1.0000 1.0000 7.97e-27 3c8p-a1-m1-cA_3c8p-a1-m1-cB
3 1okh-a1-m1-cB 46 46 0.8478 0.8478 0.8478 1.44e-22 1okh-a1-m1-cA_1okh-a1-m1-cB
4 1okh-a1-m1-cA 46 46 0.8478 0.8478 0.8478 1.44e-22 1okh-a1-m1-cA_1okh-a1-m1-cB
5 2v9b-a1-m1-cB 46 46 0.8478 0.8478 0.8478 2.05e-22 2v9b-a1-m1-cA_2v9b-a1-m1-cB
6 2v9b-a1-m1-cA 46 46 0.8478 0.8478 0.8478 2.05e-22 2v9b-a1-m1-cA_2v9b-a1-m1-cB
7 1bhp-a1-m4-cA 45 46 0.5000 0.5111 0.5000 3.19e-09 1bhp-a1-m3-cA_1bhp-a1-m4-cA
8 1bhp-a1-m3-cA 45 46 0.5000 0.5111 0.5000 3.19e-09 1bhp-a1-m3-cA_1bhp-a1-m4-cA
9 1wuw-a1-m1-cB 45 46 0.5217 0.5333 0.5217 5.35e-09 1wuw-a1-m1-cA_1wuw-a1-m1-cB
10 1wuw-a1-m1-cA 45 46 0.5217 0.5333 0.5217 5.35e-09 1wuw-a1-m1-cA_1wuw-a1-m1-cB
11 2plh-a1-m4-cA 45 46 0.5217 0.5333 0.5217 1.21e-08 2plh-a1-m3-cA_2plh-a1-m4-cA
12 2plh-a1-m3-cA 45 46 0.5217 0.5333 0.5217 1.21e-08 2plh-a1-m3-cA_2plh-a1-m4-cA
13 8dol-a1-m1-cA 540 38 0.2391 0.0204 0.2895 2.7 8dol-a1-m1-cF_8dol-a1-m1-cA
14 1imh-a1-m1-cD 281 33 0.2391 0.0391 0.3333 8.1 1imh-a1-m1-cC_1imh-a1-m1-cD
15 1imh-a1-m1-cC 281 33 0.2391 0.0391 0.3333 8.1 1imh-a1-m1-cC_1imh-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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