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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=45)
KSCCRSTLGRNCYNLCRARGAQKLCAGVCRCKISSGLSCPKGFPK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2plh-a1-m4-cA 45 45 1.0000 1.0000 1.0000 5.34e-26 2plh-a1-m3-cA_2plh-a1-m4-cA
2 2plh-a1-m3-cA 45 45 1.0000 1.0000 1.0000 5.34e-26 2plh-a1-m3-cA_2plh-a1-m4-cA
3 1bhp-a1-m4-cA 45 45 0.8889 0.8889 0.8889 1.85e-23 1bhp-a1-m3-cA_1bhp-a1-m4-cA
4 1bhp-a1-m3-cA 45 45 0.8889 0.8889 0.8889 1.85e-23 1bhp-a1-m3-cA_1bhp-a1-m4-cA
5 1wuw-a1-m1-cB 45 45 0.8222 0.8222 0.8222 2.71e-21 1wuw-a1-m1-cA_1wuw-a1-m1-cB
6 1wuw-a1-m1-cA 45 45 0.8222 0.8222 0.8222 2.71e-21 1wuw-a1-m1-cA_1wuw-a1-m1-cB
7 1okh-a1-m1-cB 46 46 0.5556 0.5435 0.5435 4.79e-09 1okh-a1-m1-cA_1okh-a1-m1-cB
8 1okh-a1-m1-cA 46 46 0.5556 0.5435 0.5435 4.79e-09 1okh-a1-m1-cA_1okh-a1-m1-cB
9 3c8p-a1-m1-cB 46 46 0.5333 0.5217 0.5217 1.18e-08 3c8p-a1-m1-cA_3c8p-a1-m1-cB
10 3c8p-a1-m1-cA 46 46 0.5333 0.5217 0.5217 1.18e-08 3c8p-a1-m1-cA_3c8p-a1-m1-cB
11 2v9b-a1-m1-cB 46 46 0.4889 0.4783 0.4783 2.36e-07 2v9b-a1-m1-cA_2v9b-a1-m1-cB
12 2v9b-a1-m1-cA 46 46 0.4889 0.4783 0.4783 2.36e-07 2v9b-a1-m1-cA_2v9b-a1-m1-cB
13 4hn7-a1-m2-cA 85 28 0.2889 0.1529 0.4643 2.2 4hn7-a1-m1-cA_4hn7-a1-m2-cA
14 4hn7-a1-m1-cA 85 28 0.2889 0.1529 0.4643 2.2 4hn7-a1-m1-cA_4hn7-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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