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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
KSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEIEYYAMLAK
TGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDII

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vi6-a2-m3-cA 97 97 1.0000 1.0000 1.0000 5.98e-68 3vi6-a2-m2-cA_3vi6-a2-m3-cA
2 3vi6-a2-m2-cA 97 97 1.0000 1.0000 1.0000 5.98e-68 3vi6-a2-m2-cA_3vi6-a2-m3-cA
3 3cpq-a1-m1-cB 101 93 0.3402 0.3267 0.3548 4.04e-19 3cpq-a1-m1-cA_3cpq-a1-m1-cB
4 3cpq-a1-m1-cA 99 93 0.3402 0.3333 0.3548 4.37e-19 3cpq-a1-m1-cA_3cpq-a1-m1-cB
5 3ra5-a1-m1-cB 97 88 0.3505 0.3505 0.3864 1.60e-18 3ra5-a1-m1-cA_3ra5-a1-m1-cB
6 3ra5-a1-m1-cA 97 88 0.3505 0.3505 0.3864 1.60e-18 3ra5-a1-m1-cA_3ra5-a1-m1-cB
7 7p5m-a1-m1-cB 394 44 0.1443 0.0355 0.3182 1.7 7p5m-a1-m1-cA_7p5m-a1-m1-cB
8 7p5m-a1-m1-cA 394 44 0.1443 0.0355 0.3182 1.7 7p5m-a1-m1-cA_7p5m-a1-m1-cB
9 1z9d-a4-m2-cC 229 22 0.1237 0.0524 0.5455 4.9 1z9d-a4-m1-cB_1z9d-a4-m2-cC, 1z9d-a4-m1-cC_1z9d-a4-m2-cC
10 1z9d-a4-m1-cC 229 22 0.1237 0.0524 0.5455 4.9 1z9d-a4-m1-cC_1z9d-a4-m2-cC
11 1z9d-a4-m1-cB 229 22 0.1237 0.0524 0.5455 4.9 1z9d-a4-m1-cB_1z9d-a4-m2-cC
12 6sxy-a1-m1-cA 337 32 0.1340 0.0386 0.4062 5.2 6sxy-a1-m1-cA_6sxy-a1-m1-cB
13 6sxy-a1-m1-cB 340 32 0.1340 0.0382 0.4062 5.2 6sxy-a1-m1-cA_6sxy-a1-m1-cB
14 5dwz-a2-m1-cD 340 27 0.1031 0.0294 0.3704 7.7 5dwz-a2-m1-cD_5dwz-a2-m1-cH
15 5dwz-a2-m1-cH 341 27 0.1031 0.0293 0.3704 7.7 5dwz-a2-m1-cD_5dwz-a2-m1-cH
16 7alz-a1-m1-cB 189 79 0.1959 0.1005 0.2405 8.1 7alz-a1-m1-cA_7alz-a1-m1-cB
17 7alz-a1-m1-cA 189 79 0.1959 0.1005 0.2405 8.1 7alz-a1-m1-cA_7alz-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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