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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
KSPTEVLLELIAEASGTTREEVKEKFLKELRKGKSPTEVLLELIAEASGTTKEEVKEKFL
KELSFGKSPTEVLLELIAEASGTTKEEVKKKFWKELS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4yy5-a3-m1-cA 97 97 1.0000 1.0000 1.0000 1.25e-58 4yy5-a3-m1-cA_4yy5-a3-m1-cB
2 4yy5-a3-m1-cB 99 97 1.0000 0.9798 1.0000 1.31e-58 4yy5-a3-m1-cA_4yy5-a3-m1-cB
3 4yy5-a3-m1-cB 99 65 0.6186 0.6061 0.9231 3.03e-31 4yy5-a3-m1-cA_4yy5-a3-m1-cB
4 2f8f-a2-m2-cB 203 76 0.2680 0.1281 0.3421 3.0 2f8f-a2-m1-cA_2f8f-a2-m2-cB
5 2c8u-a1-m1-cB 202 76 0.2680 0.1287 0.3421 3.0 2c8u-a1-m1-cA_2c8u-a1-m1-cB
6 2c8u-a1-m1-cA 202 76 0.2680 0.1287 0.3421 3.0 2c8u-a1-m1-cA_2c8u-a1-m1-cB
7 2f8f-a2-m1-cA 203 76 0.2680 0.1281 0.3421 3.1 2f8f-a2-m1-cA_2f8f-a2-m2-cB
8 1s9r-a1-m1-cB 409 59 0.1649 0.0391 0.2712 6.8 1s9r-a1-m1-cA_1s9r-a1-m1-cB
9 1s9r-a1-m1-cA 409 59 0.1649 0.0391 0.2712 6.8 1s9r-a1-m1-cA_1s9r-a1-m1-cB
10 4p5w-a1-m1-cB 306 67 0.2165 0.0686 0.3134 8.5 4p5w-a1-m1-cB_4p5w-a1-m1-cA
11 4p5w-a1-m1-cA 312 67 0.2165 0.0673 0.3134 9.7 4p5w-a1-m1-cB_4p5w-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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