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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
KSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFSGMARLLD
KMPWNQRA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2mpn-a1-m1-cB 68 68 1.0000 1.0000 1.0000 8.15e-43 2mpn-a1-m1-cA_2mpn-a1-m1-cB
2 2mpn-a1-m1-cA 68 68 1.0000 1.0000 1.0000 8.15e-43 2mpn-a1-m1-cA_2mpn-a1-m1-cB
3 6l85-a1-m1-cA 400 67 0.3382 0.0575 0.3433 0.069 6l85-a1-m1-cA_6l85-a1-m1-cB
4 6l85-a1-m1-cB 401 67 0.3382 0.0574 0.3433 0.071 6l85-a1-m1-cA_6l85-a1-m1-cB
5 2hv2-a1-m1-cE 379 56 0.2941 0.0528 0.3571 7.2 2hv2-a1-m1-cC_2hv2-a1-m1-cE, 2hv2-a1-m1-cE_2hv2-a1-m1-cF
6 2hv2-a1-m1-cC 379 56 0.2941 0.0528 0.3571 7.2 2hv2-a1-m1-cC_2hv2-a1-m1-cE
7 2hv2-a1-m1-cF 380 56 0.2941 0.0526 0.3571 7.2 2hv2-a1-m1-cE_2hv2-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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