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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
KSTPFFYPEAIVLAYLYDNEGIATYDLYKKVNAEFPSTATFYDAKKFLIQEGFVKERQER
GEKRLYLTEKGKLFAISLKTAIETYKQIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1tbx-a2-m2-cB 89 89 1.0000 1.0000 1.0000 6.78e-60 1tbx-a2-m2-cB_1tbx-a2-m1-cA, 1tbx-a2-m2-cB_1tbx-a2-m2-cA
2 1tbx-a2-m2-cA 93 88 0.9888 0.9462 1.0000 1.16e-59 1tbx-a2-m2-cB_1tbx-a2-m2-cA
3 1tbx-a2-m1-cA 93 88 0.9888 0.9462 1.0000 1.16e-59 1tbx-a2-m2-cB_1tbx-a2-m1-cA
4 4lmy-a1-m1-cA 149 32 0.1573 0.0940 0.4375 0.15 4lmy-a1-m1-cA_4lmy-a1-m1-cB
5 4lmy-a1-m1-cB 157 32 0.1573 0.0892 0.4375 0.17 4lmy-a1-m1-cA_4lmy-a1-m1-cB
6 8a9a-a1-m1-cB 809 83 0.3034 0.0334 0.3253 0.27 8a9a-a1-m1-cA_8a9a-a1-m1-cB
7 8a9a-a1-m1-cA 809 83 0.3034 0.0334 0.3253 0.27 8a9a-a1-m1-cA_8a9a-a1-m1-cB
8 1vcv-a2-m2-cB 226 77 0.2360 0.0929 0.2727 0.71 1vcv-a2-m1-cA_1vcv-a2-m2-cB
9 1vcv-a2-m1-cA 226 77 0.2360 0.0929 0.2727 0.71 1vcv-a2-m1-cA_1vcv-a2-m2-cB
10 1vcv-a1-m1-cB 226 77 0.2360 0.0929 0.2727 0.71 1vcv-a1-m1-cA_1vcv-a1-m1-cB
11 1vcv-a1-m1-cA 226 77 0.2360 0.0929 0.2727 0.71 1vcv-a1-m1-cA_1vcv-a1-m1-cB
12 3s2w-a1-m1-cA 142 69 0.2809 0.1761 0.3623 1.1 3s2w-a1-m1-cB_3s2w-a1-m1-cA
13 2pg4-a4-m4-cA 90 52 0.2360 0.2333 0.4038 1.9 2pg4-a4-m4-cA_2pg4-a4-m4-cB
14 2pg4-a3-m3-cA 90 52 0.2360 0.2333 0.4038 1.9 2pg4-a3-m1-cA_2pg4-a3-m3-cA
15 2pg4-a3-m1-cA 90 52 0.2360 0.2333 0.4038 1.9 2pg4-a3-m1-cA_2pg4-a3-m3-cA
16 2pg4-a4-m4-cB 90 52 0.2360 0.2333 0.4038 2.0 2pg4-a4-m1-cB_2pg4-a4-m4-cB, 2pg4-a4-m4-cA_2pg4-a4-m4-cB
17 2pg4-a4-m1-cB 90 52 0.2360 0.2333 0.4038 2.0 2pg4-a4-m1-cB_2pg4-a4-m4-cB
18 3bh1-a1-m1-cC 483 34 0.1461 0.0269 0.3824 2.1 3bh1-a1-m1-cC_3bh1-a1-m1-cB, 3bh1-a1-m1-cC_3bh1-a1-m1-cD
19 3bh1-a1-m1-cB 486 34 0.1461 0.0267 0.3824 2.1 3bh1-a1-m1-cB_3bh1-a1-m1-cD, 3bh1-a1-m1-cC_3bh1-a1-m1-cB
20 3bh1-a1-m1-cD 487 34 0.1461 0.0267 0.3824 2.1 3bh1-a1-m1-cB_3bh1-a1-m1-cD, 3bh1-a1-m1-cC_3bh1-a1-m1-cD
21 4mte-a1-m1-cD 151 48 0.1910 0.1126 0.3542 5.8 4mte-a1-m1-cA_4mte-a1-m1-cD
22 4mte-a1-m1-cA 149 49 0.1910 0.1141 0.3469 6.5 4mte-a1-m1-cA_4mte-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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