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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=43)
KSVVARVAEAYPEDVGKRIVRMDKYERAKLGVSVGDYVEVKKV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7dxt-a1-m2-cA 43 43 1.0000 1.0000 1.0000 2.11e-23 7dxt-a1-m1-cA_7dxt-a1-m2-cA
2 7dxt-a1-m1-cA 43 43 1.0000 1.0000 1.0000 2.11e-23 7dxt-a1-m1-cA_7dxt-a1-m2-cA
3 7dxs-a2-m1-cC 49 42 0.8372 0.7347 0.8571 1.11e-17 7dxs-a2-m1-cD_7dxs-a2-m1-cC
4 7dxs-a2-m1-cD 44 42 0.8372 0.8182 0.8571 1.28e-17 7dxs-a2-m1-cD_7dxs-a2-m1-cC
5 7dxz-a1-m3-cA 42 26 0.4884 0.5000 0.8077 6.35e-07 7dxz-a1-m1-cA_7dxz-a1-m3-cA
6 7dxz-a1-m1-cA 42 26 0.4884 0.5000 0.8077 6.35e-07 7dxz-a1-m1-cA_7dxz-a1-m3-cA
7 7u5s-a1-m1-cB 1505 37 0.2326 0.0066 0.2703 6.1 7u5s-a1-m1-cA_7u5s-a1-m1-cB
8 3bu7-a1-m2-cA 355 24 0.1860 0.0225 0.3333 7.3 3bu7-a1-m2-cA_3bu7-a1-m2-cB
9 3bu7-a1-m1-cA 355 24 0.1860 0.0225 0.3333 7.3 3bu7-a1-m1-cA_3bu7-a1-m2-cB
10 3bu7-a1-m2-cB 358 24 0.1860 0.0223 0.3333 7.3 3bu7-a1-m1-cA_3bu7-a1-m2-cB, 3bu7-a1-m2-cA_3bu7-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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