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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
KTDITSTKNELVITYHGRLRSFSEEDTYKIKAWLEDKINSNLLIEVIPQADISFSDSLRL
GYERGIILKEIKKIYPDVVIDSVNSAASSTTSKAIITT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6qvp-a3-m1-cC 98 98 1.0000 1.0000 1.0000 3.00e-66 6qvp-a3-m1-cC_6qvp-a3-m1-cD
2 6qvp-a3-m1-cD 99 98 0.9796 0.9697 0.9796 7.12e-63 6qvp-a3-m1-cC_6qvp-a3-m1-cD
3 7e3y-a1-m2-cC 257 85 0.2347 0.0895 0.2706 0.68 7e3y-a1-m2-cA_7e3y-a1-m2-cC
4 7e3y-a1-m2-cA 257 85 0.2347 0.0895 0.2706 0.68 7e3y-a1-m2-cA_7e3y-a1-m2-cC
5 7ce1-a6-m1-cS 259 60 0.1633 0.0618 0.2667 0.69 7ce1-a6-m1-cS_7ce1-a6-m1-cT
6 3gv0-a2-m2-cA 262 21 0.0918 0.0344 0.4286 4.9 3gv0-a2-m1-cA_3gv0-a2-m2-cA
7 3gv0-a2-m1-cA 262 21 0.0918 0.0344 0.4286 4.9 3gv0-a2-m1-cA_3gv0-a2-m2-cA
8 7b1c-a1-m1-cB 751 34 0.1531 0.0200 0.4412 8.4 7b1c-a1-m1-cB_7b1c-a1-m1-cA
9 7b1d-a1-m1-cC 752 34 0.1531 0.0199 0.4412 8.4 7b1d-a1-m1-cC_7b1d-a1-m1-cB
10 7b1c-a1-m1-cA 752 34 0.1531 0.0199 0.4412 8.4 7b1c-a1-m1-cB_7b1c-a1-m1-cA
11 7b1d-a1-m1-cB 753 34 0.1531 0.0199 0.4412 8.4 7b1d-a1-m1-cC_7b1d-a1-m1-cB
12 4ja8-a1-m1-cA 416 50 0.1429 0.0337 0.2800 8.9 4ja8-a1-m1-cB_4ja8-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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