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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
KTDITSTKNELVITYHGRLRSFSEEDTYKIKAWLEDKINSNLLIEVIPQASFSDSLRLGY
ERGIILKEIKKIYPDVVIDSVNSAASSTTSKAIITTINK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6qvp-a3-m1-cD 99 99 1.0000 1.0000 1.0000 4.38e-67 6qvp-a3-m1-cC_6qvp-a3-m1-cD
2 6qvp-a3-m1-cC 98 98 0.9697 0.9796 0.9796 7.19e-63 6qvp-a3-m1-cC_6qvp-a3-m1-cD
3 7b1c-a1-m1-cB 751 43 0.1818 0.0240 0.4186 0.63 7b1c-a1-m1-cB_7b1c-a1-m1-cA
4 7b1d-a1-m1-cC 752 43 0.1818 0.0239 0.4186 0.63 7b1d-a1-m1-cC_7b1d-a1-m1-cB
5 7b1c-a1-m1-cA 752 43 0.1818 0.0239 0.4186 0.63 7b1c-a1-m1-cB_7b1c-a1-m1-cA
6 7b1d-a1-m1-cB 753 43 0.1818 0.0239 0.4186 0.63 7b1d-a1-m1-cC_7b1d-a1-m1-cB
7 4e5s-a2-m1-cC 323 59 0.1818 0.0557 0.3051 3.9 4e5s-a2-m1-cD_4e5s-a2-m1-cC
8 4e5s-a2-m1-cD 322 59 0.1818 0.0559 0.3051 4.1 4e5s-a2-m1-cD_4e5s-a2-m1-cC
9 4ja8-a1-m1-cA 416 50 0.1414 0.0337 0.2800 8.9 4ja8-a1-m1-cB_4ja8-a1-m1-cA
10 7dmw-a2-m2-cB 199 36 0.1212 0.0603 0.3333 9.5 7dmw-a2-m1-cB_7dmw-a2-m2-cB
11 7dmw-a2-m1-cB 199 36 0.1212 0.0603 0.3333 9.5 7dmw-a2-m1-cB_7dmw-a2-m2-cB
12 4ja8-a1-m1-cB 406 50 0.1414 0.0345 0.2800 9.9 4ja8-a1-m1-cB_4ja8-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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