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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
KTFEELFTELQHKAANTSRTAELVDKGVHAIGKKVVEEAAEVWAAEYEGKDAAAEEISQL
LYHVQVVARGISLDDVYAHLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1yxb-a2-m1-cH 81 81 1.0000 1.0000 1.0000 2.81e-53 1yxb-a2-m1-cE_1yxb-a2-m1-cH, 1yxb-a2-m1-cG_1yxb-a2-m1-cH
2 1yxb-a2-m1-cG 81 81 1.0000 1.0000 1.0000 2.81e-53 1yxb-a2-m1-cG_1yxb-a2-m1-cH
3 1yxb-a2-m1-cE 81 81 1.0000 1.0000 1.0000 2.81e-53 1yxb-a2-m1-cE_1yxb-a2-m1-cH
4 1y6x-a3-m5-cA 86 85 0.6296 0.5930 0.6000 5.57e-25 1y6x-a3-m1-cA_1y6x-a3-m5-cA
5 1y6x-a3-m1-cA 86 85 0.6296 0.5930 0.6000 5.57e-25 1y6x-a3-m1-cA_1y6x-a3-m5-cA
6 1y6x-a2-m4-cA 86 85 0.6296 0.5930 0.6000 5.57e-25 1y6x-a2-m1-cA_1y6x-a2-m4-cA
7 1y6x-a2-m3-cA 86 85 0.6296 0.5930 0.6000 5.57e-25 1y6x-a2-m1-cA_1y6x-a2-m3-cA
8 1y6x-a2-m1-cA 86 85 0.6296 0.5930 0.6000 5.57e-25 1y6x-a2-m1-cA_1y6x-a2-m3-cA, 1y6x-a2-m1-cA_1y6x-a2-m4-cA
9 1y6x-a1-m2-cA 86 85 0.6296 0.5930 0.6000 5.57e-25 1y6x-a1-m1-cA_1y6x-a1-m2-cA
10 1y6x-a1-m1-cA 86 85 0.6296 0.5930 0.6000 5.57e-25 1y6x-a1-m1-cA_1y6x-a1-m2-cA
11 2a7w-a3-m1-cL 88 64 0.3086 0.2841 0.3906 0.001 2a7w-a3-m1-cI_2a7w-a3-m1-cL, 2a7w-a3-m1-cK_2a7w-a3-m1-cL
12 2a7w-a3-m1-cK 88 64 0.3086 0.2841 0.3906 0.001 2a7w-a3-m1-cK_2a7w-a3-m1-cL
13 2a7w-a3-m1-cI 88 64 0.3086 0.2841 0.3906 0.001 2a7w-a3-m1-cI_2a7w-a3-m1-cL
14 1yvw-a1-m1-cD 90 80 0.3086 0.2778 0.3125 0.49 1yvw-a1-m1-cA_1yvw-a1-m1-cD, 1yvw-a1-m1-cB_1yvw-a1-m1-cD, 1yvw-a1-m1-cC_1yvw-a1-m1-cD
15 1yvw-a1-m1-cC 90 80 0.3086 0.2778 0.3125 0.49 1yvw-a1-m1-cC_1yvw-a1-m1-cD
16 1yvw-a1-m1-cB 90 80 0.3086 0.2778 0.3125 0.49 1yvw-a1-m1-cB_1yvw-a1-m1-cD
17 1yvw-a1-m1-cA 90 80 0.3086 0.2778 0.3125 0.49 1yvw-a1-m1-cA_1yvw-a1-m1-cD
18 2fic-a1-m1-cA 191 57 0.2222 0.0942 0.3158 1.2 2fic-a1-m1-cA_2fic-a1-m2-cB
19 2fic-a1-m2-cB 201 57 0.2222 0.0896 0.3158 1.3 2fic-a1-m1-cA_2fic-a1-m2-cB
20 4iz6-a1-m1-cA 609 55 0.1852 0.0246 0.2727 1.4 4iz6-a1-m1-cA_4iz6-a1-m1-cB
21 4iz6-a1-m1-cB 612 55 0.1852 0.0245 0.2727 1.4 4iz6-a1-m1-cA_4iz6-a1-m1-cB
22 4top-a1-m1-cB 219 50 0.1852 0.0685 0.3000 2.2 4top-a1-m1-cA_4top-a1-m1-cB
23 4top-a1-m1-cA 218 56 0.1975 0.0734 0.2857 2.2 4top-a1-m1-cA_4top-a1-m1-cB
24 4r0g-a2-m1-cD 250 45 0.1852 0.0600 0.3333 5.1 4r0g-a2-m1-cD_4r0g-a2-m1-cC
25 6c8z-a1-m2-cA 488 42 0.1728 0.0287 0.3333 9.1 6c8z-a1-m1-cA_6c8z-a1-m2-cA
26 6c8z-a1-m1-cA 488 42 0.1728 0.0287 0.3333 9.1 6c8z-a1-m1-cA_6c8z-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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