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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=33)
KTIEVDDELYSYIASHTKHIGESASDILRRLKF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1xrx-a1-m2-cC 33 33 1.0000 1.0000 1.0000 5.08e-18 1xrx-a1-m2-cB_1xrx-a1-m2-cC
2 1xrx-a1-m2-cB 33 33 1.0000 1.0000 1.0000 5.08e-18 1xrx-a1-m2-cB_1xrx-a1-m2-cC
3 3fmt-a2-m1-cE 162 34 0.9697 0.1975 0.9412 8.37e-15 3fmt-a2-m1-cF_3fmt-a2-m1-cE
4 3fmt-a2-m1-cF 157 34 0.9697 0.2038 0.9412 9.15e-15 3fmt-a2-m1-cF_3fmt-a2-m1-cE
5 3qdk-a2-m1-cC 549 30 0.2424 0.0146 0.2667 7.7 3qdk-a2-m1-cC_3qdk-a2-m1-cD
6 3qdk-a2-m1-cD 554 30 0.2424 0.0144 0.2667 7.7 3qdk-a2-m1-cC_3qdk-a2-m1-cD
7 7ut1-a1-m1-cg 236 31 0.3030 0.0424 0.3226 9.0 7ut1-a1-m1-ch_7ut1-a1-m1-cg
8 7ut1-a1-m1-ch 231 31 0.3030 0.0433 0.3226 9.5 7ut1-a1-m1-cH_7ut1-a1-m1-ch, 7ut1-a1-m1-ch_7ut1-a1-m1-cg
9 7ut1-a1-m1-cH 230 31 0.3030 0.0435 0.3226 9.7 7ut1-a1-m1-cH_7ut1-a1-m1-ch
10 5w0b-a4-m1-cB 349 31 0.3333 0.0315 0.3548 9.9 5w0b-a4-m1-cB_5w0b-a4-m1-cC

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Reference:
Jacob Schwartz et al.

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