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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
KTLTGADALEFHKKLKERNKALHASDLELALVHADAVGKERFDLEELEKICDTSDAGRLT
DAKERNDIYERYYVEYPNVTLKEFAHIVETLFSWS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4z8t-a1-m2-cB 95 95 1.0000 1.0000 1.0000 7.08e-66 4z8t-a1-m1-cB_4z8t-a1-m2-cB
2 4z8t-a1-m1-cB 95 95 1.0000 1.0000 1.0000 7.08e-66 4z8t-a1-m1-cB_4z8t-a1-m2-cB
3 3a9z-a1-m1-cB 399 41 0.1789 0.0426 0.4146 0.071 3a9z-a1-m1-cB_3a9z-a1-m1-cA
4 3a9z-a1-m1-cA 403 41 0.1789 0.0422 0.4146 0.071 3a9z-a1-m1-cB_3a9z-a1-m1-cA
5 3gzd-a1-m1-cB 392 41 0.1684 0.0408 0.3902 0.33 3gzd-a1-m1-cB_3gzd-a1-m1-cA
6 3gzd-a1-m1-cA 396 41 0.1684 0.0404 0.3902 0.33 3gzd-a1-m1-cB_3gzd-a1-m1-cA
7 3n8h-a1-m1-cB 258 61 0.1895 0.0698 0.2951 4.1 3n8h-a1-m1-cA_3n8h-a1-m1-cB
8 3n8h-a1-m1-cA 258 61 0.1895 0.0698 0.2951 4.1 3n8h-a1-m1-cA_3n8h-a1-m1-cB
9 4oav-a1-m1-cD 674 63 0.1684 0.0237 0.2540 7.6 4oav-a1-m1-cB_4oav-a1-m1-cD
10 4oav-a1-m1-cB 673 63 0.1684 0.0238 0.2540 8.0 4oav-a1-m1-cB_4oav-a1-m1-cD
11 3au0-a1-m2-cA 339 82 0.2105 0.0590 0.2439 8.1 3au0-a1-m1-cA_3au0-a1-m2-cA
12 3au0-a1-m1-cA 339 82 0.2105 0.0590 0.2439 8.1 3au0-a1-m1-cA_3au0-a1-m2-cA
13 1hyu-a1-m2-cA 521 67 0.1789 0.0326 0.2537 8.7 1hyu-a1-m1-cA_1hyu-a1-m2-cA
14 1hyu-a1-m1-cA 521 67 0.1789 0.0326 0.2537 8.7 1hyu-a1-m1-cA_1hyu-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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