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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
KTYVLKLYVAGNTPNSVRALKTLKNILEQEFQGIYALKVIDVLKNPQLAEEDKILATPTL
SKILPPPVRKIIGDLSDRERVLIGLDLLYEELT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1r5p-a2-m2-cB 93 93 1.0000 1.0000 1.0000 1.44e-61 1r5p-a2-m2-cA_1r5p-a2-m2-cB
2 1r5p-a2-m2-cA 90 90 0.9677 1.0000 1.0000 1.43e-59 1r5p-a2-m1-cA_1r5p-a2-m2-cA, 1r5p-a2-m2-cA_1r5p-a2-m2-cB
3 1r5p-a2-m1-cA 90 90 0.9677 1.0000 1.0000 1.43e-59 1r5p-a2-m1-cA_1r5p-a2-m2-cA
4 1wwj-a1-m1-cD 98 92 0.9247 0.8776 0.9348 5.94e-58 1wwj-a1-m1-cC_1wwj-a1-m1-cD, 1wwj-a1-m1-cD_1wwj-a1-m1-cA
5 1wwj-a1-m1-cC 98 92 0.9247 0.8776 0.9348 5.94e-58 1wwj-a1-m1-cC_1wwj-a1-m1-cA, 1wwj-a1-m1-cC_1wwj-a1-m1-cD
6 1wwj-a1-m1-cA 99 92 0.9247 0.8687 0.9348 7.23e-58 1wwj-a1-m1-cC_1wwj-a1-m1-cA, 1wwj-a1-m1-cD_1wwj-a1-m1-cA
7 1vgl-a1-m1-cA 96 92 0.8710 0.8438 0.8804 3.59e-55 1vgl-a1-m1-cA_1vgl-a1-m2-cB
8 1vgl-a1-m2-cB 105 92 0.8710 0.7714 0.8804 7.04e-55 1vgl-a1-m1-cA_1vgl-a1-m2-cB
9 4kso-a1-m1-cD 102 92 0.8925 0.8137 0.9022 7.82e-55 4kso-a1-m1-cA_4kso-a1-m1-cD, 4kso-a1-m1-cC_4kso-a1-m1-cD
10 4kso-a1-m1-cC 102 92 0.8925 0.8137 0.9022 7.82e-55 4kso-a1-m1-cA_4kso-a1-m1-cC, 4kso-a1-m1-cC_4kso-a1-m1-cD
11 4kso-a1-m1-cA 95 89 0.8602 0.8421 0.8989 1.88e-52 4kso-a1-m1-cA_4kso-a1-m1-cC, 4kso-a1-m1-cA_4kso-a1-m1-cD
12 5jwq-a1-m3-cD 89 88 0.8280 0.8652 0.8750 2.04e-51 5jwq-a1-m3-cB_5jwq-a1-m3-cD
13 5jwq-a1-m3-cB 88 87 0.8172 0.8636 0.8736 9.83e-51 5jwq-a1-m3-cB_5jwq-a1-m3-cD
14 4kun-a1-m1-cB 88 83 0.3978 0.4205 0.4458 2.59e-16 4kun-a1-m1-cB_4kun-a1-m1-cA
15 4kun-a1-m1-cA 89 83 0.3978 0.4157 0.4458 2.87e-16 4kun-a1-m1-cB_4kun-a1-m1-cA
16 7rgc-a1-m2-cB 242 64 0.2151 0.0826 0.3125 1.9 7rgc-a1-m4-cA_7rgc-a1-m2-cB
17 1y71-a1-m1-cB 110 46 0.1935 0.1636 0.3913 3.1 1y71-a1-m1-cA_1y71-a1-m1-cB
18 6mfu-a2-m1-cB 215 53 0.1828 0.0791 0.3208 3.6 6mfu-a2-m1-cB_6mfu-a2-m1-cC
19 6mfu-a2-m1-cC 216 53 0.1828 0.0787 0.3208 3.9 6mfu-a2-m1-cB_6mfu-a2-m1-cC
20 1y71-a1-m1-cA 107 45 0.1828 0.1589 0.3778 5.3 1y71-a1-m1-cA_1y71-a1-m1-cB
21 8eg3-a1-m3-cA 553 53 0.1398 0.0235 0.2453 7.5 8eg3-a1-m2-cA_8eg3-a1-m3-cA
22 8eg3-a1-m2-cA 553 53 0.1398 0.0235 0.2453 7.5 8eg3-a1-m2-cA_8eg3-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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