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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
KTYVLKLYVAGNTPNSVRALKTLNNILEKEFKGVYALKVIDVLKNPQLAEEDKILATPCL
AKVLPPPVRRIIGDLSNREKVLIGLDLLYEEIGDQA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1vgl-a1-m1-cA 96 96 1.0000 1.0000 1.0000 2.03e-64 1vgl-a1-m1-cA_1vgl-a1-m2-cB
2 1vgl-a1-m2-cB 105 96 1.0000 0.9143 1.0000 3.91e-64 1vgl-a1-m1-cA_1vgl-a1-m2-cB
3 1wwj-a1-m1-cA 99 92 0.8646 0.8384 0.9022 3.70e-55 1wwj-a1-m1-cC_1wwj-a1-m1-cA, 1wwj-a1-m1-cD_1wwj-a1-m1-cA
4 1r5p-a2-m2-cB 93 92 0.8438 0.8710 0.8804 3.71e-55 1r5p-a2-m2-cA_1r5p-a2-m2-cB
5 1wwj-a1-m1-cD 98 92 0.8646 0.8469 0.9022 4.32e-55 1wwj-a1-m1-cC_1wwj-a1-m1-cD, 1wwj-a1-m1-cD_1wwj-a1-m1-cA
6 1wwj-a1-m1-cC 98 92 0.8646 0.8469 0.9022 4.32e-55 1wwj-a1-m1-cC_1wwj-a1-m1-cA, 1wwj-a1-m1-cC_1wwj-a1-m1-cD
7 5jwq-a1-m3-cD 89 88 0.8854 0.9551 0.9659 1.23e-54 5jwq-a1-m3-cB_5jwq-a1-m3-cD
8 1r5p-a2-m2-cA 90 90 0.8333 0.8889 0.8889 2.78e-54 1r5p-a2-m1-cA_1r5p-a2-m2-cA, 1r5p-a2-m2-cA_1r5p-a2-m2-cB
9 1r5p-a2-m1-cA 90 90 0.8333 0.8889 0.8889 2.78e-54 1r5p-a2-m1-cA_1r5p-a2-m2-cA
10 4kso-a1-m1-cD 102 95 0.8750 0.8235 0.8842 4.39e-54 4kso-a1-m1-cA_4kso-a1-m1-cD, 4kso-a1-m1-cC_4kso-a1-m1-cD
11 4kso-a1-m1-cC 102 95 0.8750 0.8235 0.8842 4.39e-54 4kso-a1-m1-cA_4kso-a1-m1-cC, 4kso-a1-m1-cC_4kso-a1-m1-cD
12 5jwq-a1-m3-cB 88 87 0.8750 0.9545 0.9655 6.31e-54 5jwq-a1-m3-cB_5jwq-a1-m3-cD
13 4kso-a1-m1-cA 95 92 0.8438 0.8526 0.8804 1.40e-51 4kso-a1-m1-cA_4kso-a1-m1-cC, 4kso-a1-m1-cA_4kso-a1-m1-cD
14 4kun-a1-m1-cB 88 83 0.3958 0.4318 0.4578 4.61e-16 4kun-a1-m1-cB_4kun-a1-m1-cA
15 4kun-a1-m1-cA 89 83 0.3958 0.4270 0.4578 5.04e-16 4kun-a1-m1-cB_4kun-a1-m1-cA
16 5k6x-a1-m1-cA 374 45 0.1667 0.0428 0.3556 0.85 5k6x-a1-m1-cB_5k6x-a1-m1-cA
17 5k6x-a1-m1-cB 367 37 0.1458 0.0381 0.3784 0.99 5k6x-a1-m1-cB_5k6x-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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