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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
KVEELNKATAAVPFDSVKFTGNYGNTEISYQVAKRAAKKGAKYYHITRQWQERGNNITIS
ADLYK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4evu-a2-m1-cB 65 65 1.0000 1.0000 1.0000 1.06e-43 4evu-a2-m2-cA_4evu-a2-m1-cB
2 4evu-a1-m1-cB 65 65 1.0000 1.0000 1.0000 1.06e-43 4evu-a1-m1-cA_4evu-a1-m1-cB
3 4evu-a2-m2-cA 62 65 0.9538 1.0000 0.9538 5.44e-39 4evu-a2-m2-cA_4evu-a2-m1-cB
4 4evu-a1-m1-cA 62 65 0.9538 1.0000 0.9538 5.44e-39 4evu-a1-m1-cA_4evu-a1-m1-cB
5 6cgo-a1-m1-cB 508 58 0.2462 0.0315 0.2759 0.67 6cgo-a1-m1-cB_6cgo-a1-m1-cA
6 6cgo-a1-m1-cA 520 58 0.2462 0.0308 0.2759 0.67 6cgo-a1-m1-cB_6cgo-a1-m1-cA
7 2ma8-a1-m1-cB 83 39 0.2000 0.1566 0.3333 1.9 2ma8-a1-m1-cA_2ma8-a1-m1-cB
8 2ma8-a1-m1-cA 83 39 0.2000 0.1566 0.3333 1.9 2ma8-a1-m1-cA_2ma8-a1-m1-cB
9 5xay-a4-m1-cG 210 44 0.2308 0.0714 0.3409 2.2 5xay-a4-m1-cD_5xay-a4-m1-cG
10 2jna-a1-m1-cB 104 39 0.2000 0.1250 0.3333 2.7 2jna-a1-m1-cA_2jna-a1-m1-cB
11 2jna-a1-m1-cA 104 39 0.2000 0.1250 0.3333 2.7 2jna-a1-m1-cA_2jna-a1-m1-cB
12 5xay-a4-m1-cD 192 44 0.2308 0.0781 0.3409 5.8 5xay-a4-m1-cD_5xay-a4-m1-cG
13 3pa8-a1-m1-cB 242 21 0.1538 0.0413 0.4762 5.9 3pa8-a1-m1-cB_3pa8-a1-m1-cA
14 3lyu-a4-m1-cF 126 18 0.1231 0.0635 0.4444 6.7 3lyu-a4-m1-cE_3lyu-a4-m1-cF
15 3lyu-a4-m1-cE 126 18 0.1231 0.0635 0.4444 6.7 3lyu-a4-m1-cE_3lyu-a4-m1-cF
16 3lyu-a1-m1-cE 126 18 0.1231 0.0635 0.4444 6.7 3lyu-a1-m1-cD_3lyu-a1-m1-cE
17 3lyu-a1-m1-cD 126 18 0.1231 0.0635 0.4444 6.7 3lyu-a1-m1-cD_3lyu-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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