Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=93)
KVMTKDLEIDRATREVIFKGDLITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGYNHFP
TTRTVDTHVLQLRQKLPGLEIETLRGVGYKMKA

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 7e1f-a1-m1-cA 95 93 1.0000 0.9789 1.0000 5.20e-64 7e1f-a1-m1-cB_7e1f-a1-m1-cA
2 7e1f-a1-m1-cB 93 93 1.0000 1.0000 1.0000 5.64e-64 7e1f-a1-m1-cB_7e1f-a1-m1-cA
3 7e1b-a2-m1-cE 209 93 0.9677 0.4306 0.9677 1.22e-57 7e1b-a2-m1-cH_7e1b-a2-m1-cE
4 7e1b-a1-m1-cC 209 93 0.9677 0.4306 0.9677 1.27e-57 7e1b-a1-m1-cD_7e1b-a1-m1-cC
5 7e1b-a2-m1-cH 208 93 0.9570 0.4279 0.9570 7.66e-57 7e1b-a2-m1-cF_7e1b-a2-m1-cH, 7e1b-a2-m1-cH_7e1b-a2-m1-cE
6 7e1b-a2-m1-cF 208 93 0.9570 0.4279 0.9570 7.66e-57 7e1b-a2-m1-cF_7e1b-a2-m1-cH
7 7e1b-a1-m1-cD 208 93 0.9570 0.4279 0.9570 1.02e-56 7e1b-a1-m1-cD_7e1b-a1-m1-cC
8 6kyx-a1-m2-cA 100 90 0.4194 0.3900 0.4333 5.49e-19 6kyx-a1-m1-cA_6kyx-a1-m2-cA
9 6kyx-a1-m1-cA 100 90 0.4194 0.3900 0.4333 5.49e-19 6kyx-a1-m1-cA_6kyx-a1-m2-cA
10 2oqr-a1-m2-cA 226 82 0.3978 0.1637 0.4512 1.44e-16 2oqr-a1-m1-cA_2oqr-a1-m2-cA
11 2oqr-a1-m1-cA 226 82 0.3978 0.1637 0.4512 1.44e-16 2oqr-a1-m1-cA_2oqr-a1-m2-cA
12 5za3-a1-m1-cB 100 80 0.3978 0.3700 0.4625 3.12e-15 5za3-a1-m1-cB_5za3-a1-m1-cA
13 5za3-a1-m1-cA 101 80 0.3978 0.3663 0.4625 3.38e-15 5za3-a1-m1-cB_5za3-a1-m1-cA
14 5ed4-a2-m1-cF 214 90 0.3763 0.1636 0.3889 6.14e-14 5ed4-a2-m1-cF_5ed4-a2-m1-cE
15 2pmu-a1-m1-cD 96 90 0.3763 0.3646 0.3889 6.54e-14 2pmu-a1-m1-cC_2pmu-a1-m1-cD
16 3r0j-a1-m1-cB 218 90 0.3763 0.1606 0.3889 6.74e-14 3r0j-a1-m1-cB_3r0j-a1-m1-cA
17 5ed4-a2-m1-cE 224 90 0.3763 0.1562 0.3889 6.77e-14 5ed4-a2-m1-cF_5ed4-a2-m1-cE
18 3r0j-a1-m1-cA 221 90 0.3763 0.1584 0.3889 6.79e-14 3r0j-a1-m1-cB_3r0j-a1-m1-cA
19 3q9v-a1-m1-cA 98 92 0.3548 0.3367 0.3587 2.78e-13 3q9v-a1-m1-cA_3q9v-a1-m2-cB
20 3q9v-a1-m2-cB 99 92 0.3548 0.3333 0.3587 2.82e-13 3q9v-a1-m1-cA_3q9v-a1-m2-cB
21 2pmu-a1-m1-cC 92 90 0.3656 0.3696 0.3778 7.07e-13 2pmu-a1-m1-cC_2pmu-a1-m1-cD
22 4b09-a1-m1-cA 216 97 0.3656 0.1574 0.3505 8.20e-13 4b09-a1-m1-cB_4b09-a1-m1-cA
23 4b09-a1-m1-cB 214 92 0.3656 0.1589 0.3696 1.77e-12 4b09-a1-m1-cB_4b09-a1-m1-cA
24 5x5l-a1-m1-cA 95 91 0.3871 0.3789 0.3956 1.89e-12 5x5l-a1-m1-cA_5x5l-a1-m1-cE
25 5x5l-a1-m1-cE 98 94 0.3978 0.3776 0.3936 3.01e-11 5x5l-a1-m1-cA_5x5l-a1-m1-cE
26 1ys7-a1-m1-cB 226 90 0.3871 0.1593 0.4000 4.83e-11 1ys7-a1-m1-cA_1ys7-a1-m1-cB
27 5u8m-a1-m1-cB 229 93 0.3871 0.1572 0.3871 5.50e-11 5u8m-a1-m1-cA_5u8m-a1-m1-cB
28 5u8m-a1-m1-cA 229 93 0.3871 0.1572 0.3871 5.50e-11 5u8m-a1-m1-cA_5u8m-a1-m1-cB
29 1ys7-a1-m1-cA 224 89 0.3978 0.1652 0.4157 1.01e-10 1ys7-a1-m1-cA_1ys7-a1-m1-cB
30 4nhj-a1-m1-cB 101 88 0.3226 0.2970 0.3409 3.21e-10 4nhj-a1-m1-cB_4nhj-a1-m1-cA
31 4nhj-a1-m1-cA 102 88 0.3226 0.2941 0.3409 3.35e-10 4nhj-a1-m1-cB_4nhj-a1-m1-cA
32 4kfc-a1-m1-cB 224 95 0.3763 0.1562 0.3684 1.52e-07 4kfc-a1-m1-cA_4kfc-a1-m1-cB
33 4kfc-a1-m1-cA 223 95 0.3763 0.1570 0.3684 1.61e-07 4kfc-a1-m1-cA_4kfc-a1-m1-cB
34 4s04-a2-m1-cF 219 80 0.2688 0.1142 0.3125 4.85e-06 4s04-a2-m1-cE_4s04-a2-m1-cF
35 4s04-a2-m1-cE 219 80 0.2688 0.1142 0.3125 4.85e-06 4s04-a2-m1-cE_4s04-a2-m1-cF
36 6lxm-a2-m1-cA 100 88 0.2581 0.2400 0.2727 3.94e-04 6lxm-a2-m1-cA_6lxm-a2-m1-cB
37 5dcm-a1-m1-cA 97 73 0.2258 0.2165 0.2877 4.26e-04 5dcm-a1-m1-cA_5dcm-a1-m1-cB
38 6lxn-a1-m1-cB 101 88 0.2581 0.2376 0.2727 4.40e-04 6lxn-a1-m1-cB_6lxn-a1-m1-cA
39 6lxm-a2-m1-cB 101 88 0.2581 0.2376 0.2727 4.40e-04 6lxm-a2-m1-cA_6lxm-a2-m1-cB
40 5dcm-a1-m1-cB 98 73 0.2258 0.2143 0.2877 4.52e-04 5dcm-a1-m1-cA_5dcm-a1-m1-cB
41 6lxn-a1-m1-cA 110 88 0.2581 0.2182 0.2727 5.53e-04 6lxn-a1-m1-cB_6lxn-a1-m1-cA
42 6zwt-a2-m1-cD 99 87 0.2903 0.2727 0.3103 0.001 6zwt-a2-m1-cB_6zwt-a2-m1-cD
43 6zwt-a2-m1-cB 99 87 0.2903 0.2727 0.3103 0.001 6zwt-a2-m1-cB_6zwt-a2-m1-cD
44 1p35-a1-m1-cC 295 46 0.1290 0.0407 0.2609 2.3 1p35-a1-m1-cC_1p35-a1-m1-cA
45 1p35-a2-m2-cB 298 46 0.1290 0.0403 0.2609 2.4 1p35-a2-m1-cB_1p35-a2-m2-cB
46 1p35-a2-m1-cB 298 46 0.1290 0.0403 0.2609 2.4 1p35-a2-m1-cB_1p35-a2-m2-cB
47 1p35-a1-m1-cA 299 46 0.1290 0.0401 0.2609 2.4 1p35-a1-m1-cC_1p35-a1-m1-cA
48 3td7-a1-m2-cA 253 26 0.1505 0.0553 0.5385 6.9 3td7-a1-m1-cA_3td7-a1-m2-cA
49 3td7-a1-m1-cA 253 26 0.1505 0.0553 0.5385 6.9 3td7-a1-m1-cA_3td7-a1-m2-cA
50 3w36-a1-m1-cA 470 25 0.1398 0.0277 0.5200 7.7 3w36-a1-m1-cA_3w36-a1-m1-cB
51 3w36-a1-m1-cB 471 25 0.1398 0.0276 0.5200 7.7 3w36-a1-m1-cA_3w36-a1-m1-cB
52 8egk-a1-m1-cB 353 43 0.1505 0.0397 0.3256 9.8 8egk-a1-m1-cA_8egk-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600