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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
KVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLD
VAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1p3h-a3-m1-cK 98 98 1.0000 1.0000 1.0000 3.86e-66 1p3h-a3-m1-cJ_1p3h-a3-m1-cK
2 1p3h-a3-m1-cJ 98 98 1.0000 1.0000 1.0000 3.86e-66 1p3h-a3-m1-cJ_1p3h-a3-m1-cK
3 1p3h-a3-m1-cC 98 98 1.0000 1.0000 1.0000 3.86e-66 1p3h-a3-m1-cC_1p3h-a3-m1-cH
4 1p3h-a3-m1-cM 99 98 1.0000 0.9899 1.0000 4.12e-66 1p3h-a3-m1-cD_1p3h-a3-m1-cM
5 1p3h-a3-m1-cH 99 98 1.0000 0.9899 1.0000 4.12e-66 1p3h-a3-m1-cC_1p3h-a3-m1-cH
6 1p3h-a3-m1-cD 99 98 1.0000 0.9899 1.0000 4.12e-66 1p3h-a3-m1-cD_1p3h-a3-m1-cM
7 1hx5-a1-m1-cC 82 93 0.8367 1.0000 0.8817 3.31e-49 1hx5-a1-m1-cB_1hx5-a1-m1-cC
8 1hx5-a1-m1-cB 82 93 0.8367 1.0000 0.8817 3.31e-49 1hx5-a1-m1-cB_1hx5-a1-m1-cC
9 1lep-a1-m1-cG 81 98 0.7653 0.9259 0.7653 9.29e-45 1lep-a1-m1-cF_1lep-a1-m1-cG
10 1lep-a1-m1-cF 81 98 0.7653 0.9259 0.7653 9.29e-45 1lep-a1-m1-cF_1lep-a1-m1-cG
11 1wnr-a1-m1-cC 84 94 0.5306 0.6190 0.5532 3.00e-29 1wnr-a1-m1-cD_1wnr-a1-m1-cC
12 1wnr-a1-m1-cE 75 94 0.4592 0.6000 0.4787 9.26e-22 1wnr-a1-m1-cD_1wnr-a1-m1-cE
13 1wnr-a1-m1-cD 75 94 0.4592 0.6000 0.4787 9.26e-22 1wnr-a1-m1-cD_1wnr-a1-m1-cC, 1wnr-a1-m1-cD_1wnr-a1-m1-cE
14 7ekq-a1-m1-cS 194 95 0.4184 0.2113 0.4316 4.34e-21 7ekq-a1-m1-cR_7ekq-a1-m1-cS
15 7ekq-a1-m1-cS 194 94 0.3061 0.1546 0.3191 1.76e-13 7ekq-a1-m1-cR_7ekq-a1-m1-cS
16 7ekq-a1-m1-cR 194 95 0.4184 0.2113 0.4316 4.34e-21 7ekq-a1-m1-cR_7ekq-a1-m1-cS
17 7ekq-a1-m1-cR 194 94 0.3061 0.1546 0.3191 1.76e-13 7ekq-a1-m1-cR_7ekq-a1-m1-cS
18 1pf9-a1-m1-cR 97 96 0.4490 0.4536 0.4583 9.36e-21 1pf9-a1-m1-cQ_1pf9-a1-m1-cR
19 1pf9-a1-m1-cQ 97 96 0.4490 0.4536 0.4583 9.36e-21 1pf9-a1-m1-cQ_1pf9-a1-m1-cR
20 1dlp-a1-m1-cC 234 50 0.1633 0.0684 0.3200 1.9 1dlp-a1-m1-cF_1dlp-a1-m1-cC
21 1xty-a2-m1-cD 120 39 0.1327 0.1083 0.3333 3.5 1xty-a2-m1-cC_1xty-a2-m1-cD
22 1xty-a2-m1-cC 120 39 0.1327 0.1083 0.3333 3.5 1xty-a2-m1-cC_1xty-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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