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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=35)
KVSALKEKVSALKEQFLMLMFKVSALKEKVSALKE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3tq2-a1-m3-cA 35 35 1.0000 1.0000 1.0000 6.33e-16 3tq2-a1-m2-cA_3tq2-a1-m3-cA
2 3tq2-a1-m2-cA 35 35 1.0000 1.0000 1.0000 6.33e-16 3tq2-a1-m2-cA_3tq2-a1-m3-cA
3 7a4d-a2-m1-cL 40 25 0.3429 0.3000 0.4800 0.66 7a4d-a2-m1-cK_7a4d-a2-m1-cL
4 7a4d-a2-m1-cK 40 25 0.3429 0.3000 0.4800 0.66 7a4d-a2-m1-cK_7a4d-a2-m1-cL
5 7a48-a1-m2-cB 40 25 0.3429 0.3000 0.4800 0.66 7a48-a1-m1-cB_7a48-a1-m2-cB
6 7a48-a1-m1-cB 40 25 0.3429 0.3000 0.4800 0.66 7a48-a1-m1-cB_7a48-a1-m2-cB
7 7qdk-a1-m1-cC 29 27 0.3143 0.3793 0.4074 0.95 7qdk-a1-m1-cB_7qdk-a1-m1-cC
8 7qdk-a1-m1-cB 29 27 0.3143 0.3793 0.4074 0.95 7qdk-a1-m1-cB_7qdk-a1-m1-cC
9 1jun-a1-m1-cB 43 35 0.3714 0.3023 0.3714 2.4 1jun-a1-m1-cA_1jun-a1-m1-cB
10 1jun-a1-m1-cA 43 35 0.3714 0.3023 0.3714 2.4 1jun-a1-m1-cA_1jun-a1-m1-cB
11 1ecm-a2-m1-cB 95 17 0.2857 0.1053 0.5882 5.8 1ecm-a2-m1-cA_1ecm-a2-m1-cB
12 1ecm-a1-m2-cB 95 17 0.2857 0.1053 0.5882 5.8 1ecm-a1-m1-cB_1ecm-a1-m2-cB
13 1ecm-a1-m1-cB 95 17 0.2857 0.1053 0.5882 5.8 1ecm-a1-m1-cB_1ecm-a1-m2-cB
14 1ecm-a2-m1-cA 91 17 0.2857 0.1099 0.5882 5.8 1ecm-a2-m1-cA_1ecm-a2-m1-cB
15 5t01-a1-m1-cB 62 35 0.3714 0.2097 0.3714 6.1 5t01-a1-m1-cA_5t01-a1-m1-cB
16 5t01-a1-m1-cA 62 35 0.3714 0.2097 0.3714 6.1 5t01-a1-m1-cA_5t01-a1-m1-cB
17 6i1j-a2-m6-cA 30 27 0.1714 0.2000 0.2222 7.8 6i1j-a2-m1-cA_6i1j-a2-m6-cA, 6i1j-a2-m2-cA_6i1j-a2-m6-cA
18 6i1j-a2-m2-cA 30 27 0.1714 0.2000 0.2222 7.8 6i1j-a2-m2-cA_6i1j-a2-m6-cA
19 6i1j-a2-m1-cA 30 27 0.1714 0.2000 0.2222 7.8 6i1j-a2-m1-cA_6i1j-a2-m6-cA

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Reference:
Jacob Schwartz et al.

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