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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
KVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4e1p-a1-m1-cA 55 55 1.0000 1.0000 1.0000 8.92e-34 4e1p-a1-m1-cA_4e1p-a1-m1-cB
2 4e1p-a1-m1-cB 56 55 1.0000 0.9821 1.0000 9.77e-34 4e1p-a1-m1-cA_4e1p-a1-m1-cB
3 4li1-a2-m2-cA 424 37 0.3091 0.0401 0.4595 0.76 4li1-a2-m2-cA_4li1-a2-m1-cB
4 4li1-a1-m1-cA 424 37 0.3091 0.0401 0.4595 0.76 4li1-a1-m1-cA_4li1-a1-m1-cB
5 4li1-a2-m1-cB 425 37 0.3091 0.0400 0.4595 0.76 4li1-a2-m2-cA_4li1-a2-m1-cB
6 4li1-a1-m1-cB 425 37 0.3091 0.0400 0.4595 0.76 4li1-a1-m1-cA_4li1-a1-m1-cB
7 1au7-a1-m1-cB 128 24 0.1818 0.0781 0.4167 1.4 1au7-a1-m1-cB_1au7-a1-m1-cA
8 6e7o-a1-m1-cB 161 28 0.2182 0.0745 0.4286 2.6 6e7o-a1-m1-cB_6e7o-a1-m1-cA
9 3l1p-a1-m1-cA 147 19 0.1818 0.0680 0.5263 4.1 3l1p-a1-m1-cB_3l1p-a1-m1-cA
10 3l1p-a1-m1-cB 145 19 0.1818 0.0690 0.5263 4.1 3l1p-a1-m1-cB_3l1p-a1-m1-cA
11 1au7-a1-m1-cA 130 19 0.1636 0.0692 0.4737 7.7 1au7-a1-m1-cB_1au7-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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