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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=42)
KVVARVAEARAEDVGKRVVRVDKAERAKVGVKVGDVVEVKKV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7dxz-a1-m3-cA 42 42 1.0000 1.0000 1.0000 1.37e-18 7dxz-a1-m1-cA_7dxz-a1-m3-cA
2 7dxz-a1-m1-cA 42 42 1.0000 1.0000 1.0000 1.37e-18 7dxz-a1-m1-cA_7dxz-a1-m3-cA
3 7dxt-a1-m2-cA 43 41 0.7857 0.7674 0.8049 7.06e-15 7dxt-a1-m1-cA_7dxt-a1-m2-cA
4 7dxt-a1-m1-cA 43 41 0.7857 0.7674 0.8049 7.06e-15 7dxt-a1-m1-cA_7dxt-a1-m2-cA
5 7dxs-a2-m1-cC 49 38 0.6429 0.5510 0.7105 3.70e-11 7dxs-a2-m1-cD_7dxs-a2-m1-cC
6 7dxs-a2-m1-cD 44 38 0.6429 0.6136 0.7105 5.22e-11 7dxs-a2-m1-cD_7dxs-a2-m1-cC
7 2hg4-a1-m1-cB 867 31 0.2619 0.0127 0.3548 4.3 2hg4-a1-m1-cA_2hg4-a1-m1-cB
8 2hg4-a1-m1-cA 867 31 0.2619 0.0127 0.3548 4.3 2hg4-a1-m1-cA_2hg4-a1-m1-cB
9 3bu7-a1-m2-cA 355 34 0.2619 0.0310 0.3235 5.1 3bu7-a1-m2-cA_3bu7-a1-m2-cB
10 3bu7-a1-m1-cA 355 34 0.2619 0.0310 0.3235 5.1 3bu7-a1-m1-cA_3bu7-a1-m2-cB
11 3bu7-a1-m2-cB 358 34 0.2619 0.0307 0.3235 5.1 3bu7-a1-m1-cA_3bu7-a1-m2-cB, 3bu7-a1-m2-cA_3bu7-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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