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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
KYIPRIAEDMTIQEAKKFARENNIKEGKIDEIMHDSIQDTAEQKVQLLLCWYQSHGKSDA
YQDLIKGLKKAECRRTLDKFQDMVQK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3oq9-a1-m1-cD 86 86 1.0000 1.0000 1.0000 3.26e-60 3oq9-a1-m1-cC_3oq9-a1-m1-cD
2 3oq9-a1-m1-cC 86 86 1.0000 1.0000 1.0000 3.26e-60 3oq9-a1-m1-cB_3oq9-a1-m1-cC, 3oq9-a1-m1-cC_3oq9-a1-m1-cD
3 3oq9-a1-m1-cB 86 86 1.0000 1.0000 1.0000 3.26e-60 3oq9-a1-m1-cB_3oq9-a1-m1-cC
4 3ezq-a4-m1-cO 115 86 0.5349 0.4000 0.5349 3.19e-25 3ezq-a4-m1-cM_3ezq-a4-m1-cO
5 3ezq-a4-m1-cM 115 86 0.5349 0.4000 0.5349 3.19e-25 3ezq-a4-m1-cM_3ezq-a4-m1-cO
6 4kt8-a1-m2-cA 289 29 0.1163 0.0346 0.3448 0.95 4kt8-a1-m1-cA_4kt8-a1-m2-cA
7 4kt8-a1-m1-cA 289 29 0.1163 0.0346 0.3448 0.95 4kt8-a1-m1-cA_4kt8-a1-m2-cA
8 2of5-a1-m1-cF 91 40 0.1395 0.1319 0.3000 3.1 2of5-a1-m1-cE_2of5-a1-m1-cF
9 2of5-a1-m1-cE 91 40 0.1395 0.1319 0.3000 3.1 2of5-a1-m1-cA_2of5-a1-m1-cE, 2of5-a1-m1-cD_2of5-a1-m1-cE, 2of5-a1-m1-cE_2of5-a1-m1-cF
10 2of5-a1-m1-cD 91 40 0.1395 0.1319 0.3000 3.1 2of5-a1-m1-cD_2of5-a1-m1-cE
11 2of5-a1-m1-cA 91 40 0.1395 0.1319 0.3000 3.1 2of5-a1-m1-cA_2of5-a1-m1-cE
12 2q58-a1-m1-cA 335 16 0.0930 0.0239 0.5000 3.2 2q58-a1-m1-cB_2q58-a1-m1-cA
13 2q58-a1-m1-cB 329 16 0.0930 0.0243 0.5000 3.3 2q58-a1-m1-cB_2q58-a1-m1-cA
14 2wv1-a1-m1-cA 183 47 0.1860 0.0874 0.3404 4.9 2wv1-a1-m1-cA_2wv1-a1-m1-cB
15 6ck7-a2-m1-cD 172 78 0.2209 0.1105 0.2436 6.7 6ck7-a2-m1-cC_6ck7-a2-m1-cD
16 6ck7-a2-m1-cC 172 78 0.2209 0.1105 0.2436 6.7 6ck7-a2-m1-cC_6ck7-a2-m1-cD
17 5wgx-a2-m2-cA 664 65 0.2209 0.0286 0.2923 6.7 5wgx-a2-m1-cA_5wgx-a2-m2-cA
18 5wgx-a2-m1-cA 664 65 0.2209 0.0286 0.2923 6.7 5wgx-a2-m1-cA_5wgx-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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