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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
KYKKAMVSNAQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSI
LQFQFAEVKEALKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4h22-a2-m1-cD 74 74 1.0000 1.0000 1.0000 3.84e-48 4h22-a2-m1-cC_4h22-a2-m1-cD
2 4h22-a2-m1-cC 74 74 1.0000 1.0000 1.0000 3.84e-48 4h22-a2-m1-cC_4h22-a2-m1-cD
3 3tnu-a1-m2-cA 90 48 0.2162 0.1778 0.3333 0.16 3tnu-a1-m1-cA_3tnu-a1-m2-cA
4 3tnu-a1-m1-cA 90 48 0.2162 0.1778 0.3333 0.16 3tnu-a1-m1-cA_3tnu-a1-m2-cA
5 4d2q-a1-m1-cF 771 41 0.2162 0.0208 0.3902 4.4 4d2q-a1-m1-cE_4d2q-a1-m1-cF
6 4d2q-a1-m1-cE 771 41 0.2162 0.0208 0.3902 4.4 4d2q-a1-m1-cE_4d2q-a1-m1-cF
7 3gaa-a1-m2-cE 243 49 0.2027 0.0617 0.3061 5.8 3gaa-a1-m1-cD_3gaa-a1-m2-cE, 3gaa-a1-m2-cD_3gaa-a1-m2-cE
8 3gaa-a1-m1-cA 243 49 0.2027 0.0617 0.3061 5.8 3gaa-a1-m2-cD_3gaa-a1-m1-cA
9 3gaa-a1-m2-cD 242 49 0.2027 0.0620 0.3061 6.4 3gaa-a1-m2-cD_3gaa-a1-m1-cA, 3gaa-a1-m2-cD_3gaa-a1-m2-cE
10 3gaa-a1-m1-cD 242 49 0.2027 0.0620 0.3061 6.4 3gaa-a1-m1-cD_3gaa-a1-m2-cE

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Reference:
Jacob Schwartz et al.

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