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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
KYRKQVINRLARIEGHVRAIKEMAAEGRDCPDILLQIAAVRKALDSTAKVIFADHMESCL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ahx-a1-m2-cA 60 60 1.0000 1.0000 1.0000 4.71e-39 6ahx-a1-m1-cA_6ahx-a1-m2-cA
2 6ahx-a1-m1-cA 60 60 1.0000 1.0000 1.0000 4.71e-39 6ahx-a1-m1-cA_6ahx-a1-m2-cA
3 5fmn-a1-m2-cA 86 57 0.5000 0.3488 0.5263 5.42e-20 5fmn-a1-m2-cA_5fmn-a1-m2-cB
4 5fmn-a1-m1-cA 86 57 0.5000 0.3488 0.5263 5.42e-20 5fmn-a1-m1-cA_5fmn-a1-m2-cB
5 5fmn-a1-m2-cB 89 57 0.5000 0.3371 0.5263 6.33e-20 5fmn-a1-m1-cA_5fmn-a1-m2-cB, 5fmn-a1-m2-cA_5fmn-a1-m2-cB
6 4m1p-a2-m9-cA 96 57 0.3500 0.2188 0.3684 7.41e-09 4m1p-a2-m12-cA_4m1p-a2-m9-cA
7 4m1p-a2-m12-cA 96 57 0.3500 0.2188 0.3684 7.41e-09 4m1p-a2-m12-cA_4m1p-a2-m9-cA
8 4m1p-a1-m4-cA 96 57 0.3500 0.2188 0.3684 7.41e-09 4m1p-a1-m3-cA_4m1p-a1-m4-cA
9 4m1p-a1-m3-cA 96 57 0.3500 0.2188 0.3684 7.41e-09 4m1p-a1-m3-cA_4m1p-a1-m4-cA
10 4adz-a1-m2-cB 90 60 0.3833 0.2556 0.3833 2.11e-08 4adz-a1-m2-cA_4adz-a1-m2-cB
11 4adz-a1-m2-cA 90 60 0.3833 0.2556 0.3833 2.11e-08 4adz-a1-m2-cA_4adz-a1-m2-cB
12 4uig-a1-m4-cA 91 60 0.3833 0.2527 0.3833 2.15e-08 4uig-a1-m3-cA_4uig-a1-m4-cA
13 4uig-a1-m3-cA 91 60 0.3833 0.2527 0.3833 2.15e-08 4uig-a1-m3-cA_4uig-a1-m4-cA
14 2hh7-a2-m4-cA 85 58 0.3000 0.2118 0.3103 1.37e-07 2hh7-a2-m1-cA_2hh7-a2-m4-cA, 2hh7-a2-m3-cA_2hh7-a2-m4-cA
15 2hh7-a2-m3-cA 85 58 0.3000 0.2118 0.3103 1.37e-07 2hh7-a2-m3-cA_2hh7-a2-m4-cA
16 2hh7-a2-m1-cA 85 58 0.3000 0.2118 0.3103 1.37e-07 2hh7-a2-m1-cA_2hh7-a2-m4-cA
17 5lcy-a1-m1-cD 88 60 0.3500 0.2386 0.3500 2.80e-04 5lcy-a1-m1-cA_5lcy-a1-m1-cD, 5lcy-a1-m1-cC_5lcy-a1-m1-cD
18 5lcy-a1-m1-cC 88 60 0.3500 0.2386 0.3500 2.80e-04 5lcy-a1-m1-cC_5lcy-a1-m1-cD
19 5lcy-a1-m1-cA 88 60 0.3500 0.2386 0.3500 2.80e-04 5lcy-a1-m1-cA_5lcy-a1-m1-cD
20 5lbm-a1-m1-cD 89 49 0.3167 0.2135 0.3878 0.001 5lbm-a1-m1-cA_5lbm-a1-m1-cD, 5lbm-a1-m1-cB_5lbm-a1-m1-cD, 5lbm-a1-m1-cC_5lbm-a1-m1-cD
21 5lbm-a1-m1-cC 89 49 0.3167 0.2135 0.3878 0.001 5lbm-a1-m1-cC_5lbm-a1-m1-cD
22 5lbm-a1-m1-cB 82 48 0.3167 0.2317 0.3958 0.001 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cB_5lbm-a1-m1-cD
23 5lbm-a1-m1-cA 82 48 0.3167 0.2317 0.3958 0.001 5lbm-a1-m1-cA_5lbm-a1-m1-cB, 5lbm-a1-m1-cA_5lbm-a1-m1-cD
24 4e70-a1-m1-cA 359 36 0.2333 0.0390 0.3889 4.0 4e70-a1-m1-cB_4e70-a1-m1-cA
25 3ayx-a1-m1-cC 595 16 0.1500 0.0151 0.5625 8.5 3ayx-a1-m1-cA_3ayx-a1-m1-cC
26 3ayx-a1-m1-cA 595 16 0.1500 0.0151 0.5625 8.5 3ayx-a1-m1-cA_3ayx-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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