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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
KYTRRTGRTWADDQATYNRLREEADAARQKLRESGYSGAEYDQLRQAAFDLNRKANQYWE
QMLSDLRQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7xnj-a1-m1-cD 68 68 1.0000 1.0000 1.0000 6.10e-44 7xnj-a1-m1-cC_7xnj-a1-m1-cD, 7xnj-a1-m1-cD_7xnj-a1-m1-cB
2 7xnj-a1-m1-cB 69 68 1.0000 0.9855 1.0000 7.00e-44 7xnj-a1-m1-cD_7xnj-a1-m1-cB
3 7xnj-a1-m1-cC 62 64 0.9118 1.0000 0.9688 2.15e-37 7xnj-a1-m1-cC_7xnj-a1-m1-cD
4 2b0c-a1-m2-cA 199 54 0.2206 0.0754 0.2778 1.8 2b0c-a1-m1-cA_2b0c-a1-m2-cA
5 2b0c-a1-m1-cA 199 54 0.2206 0.0754 0.2778 1.8 2b0c-a1-m1-cA_2b0c-a1-m2-cA
6 5tky-a1-m1-cB 591 66 0.2794 0.0321 0.2879 2.8 5tky-a1-m1-cB_5tky-a1-m1-cA
7 3u66-a3-m4-cA 166 40 0.2059 0.0843 0.3500 2.9 3u66-a3-m1-cA_3u66-a3-m4-cA, 3u66-a3-m2-cA_3u66-a3-m4-cA, 3u66-a3-m3-cA_3u66-a3-m4-cA
8 3u66-a3-m3-cA 166 40 0.2059 0.0843 0.3500 2.9 3u66-a3-m3-cA_3u66-a3-m4-cA
9 3u66-a3-m2-cA 166 40 0.2059 0.0843 0.3500 2.9 3u66-a3-m2-cA_3u66-a3-m4-cA
10 3u66-a3-m1-cA 166 40 0.2059 0.0843 0.3500 2.9 3u66-a3-m1-cA_3u66-a3-m4-cA
11 2ipc-a2-m1-cC 939 65 0.2794 0.0202 0.2923 3.0 2ipc-a2-m1-cD_2ipc-a2-m1-cC
12 5tky-a1-m1-cA 597 66 0.2794 0.0318 0.2879 3.2 5tky-a1-m1-cB_5tky-a1-m1-cA
13 2ipc-a2-m1-cD 934 65 0.2794 0.0203 0.2923 3.2 2ipc-a2-m1-cD_2ipc-a2-m1-cC
14 6asy-a1-m1-cB 606 79 0.3088 0.0347 0.2658 3.8 6asy-a1-m1-cA_6asy-a1-m1-cB
15 6asy-a1-m1-cA 606 79 0.3088 0.0347 0.2658 3.8 6asy-a1-m1-cA_6asy-a1-m1-cB
16 6do2-a1-m1-cB 382 79 0.3088 0.0550 0.2658 3.9 6do2-a1-m1-cA_6do2-a1-m1-cB
17 6do2-a1-m1-cA 382 79 0.3088 0.0550 0.2658 3.9 6do2-a1-m1-cA_6do2-a1-m1-cB
18 3wir-a2-m1-cD 756 17 0.1324 0.0119 0.5294 5.1 3wir-a2-m1-cB_3wir-a2-m1-cD
19 3wir-a2-m1-cB 756 17 0.1324 0.0119 0.5294 5.1 3wir-a2-m1-cB_3wir-a2-m1-cD
20 4g56-a1-m2-cC 590 29 0.1471 0.0169 0.3448 5.4 4g56-a1-m2-cC_4g56-a1-m1-cA, 4g56-a1-m2-cC_4g56-a1-m2-cA
21 7a4u-a1-m3-cA 523 79 0.2941 0.0382 0.2532 5.4 7a4u-a1-m1-cA_7a4u-a1-m3-cA
22 7a4u-a1-m1-cA 523 79 0.2941 0.0382 0.2532 5.4 7a4u-a1-m1-cA_7a4u-a1-m3-cA
23 4g56-a1-m2-cA 604 29 0.1471 0.0166 0.3448 5.8 4g56-a1-m2-cC_4g56-a1-m2-cA
24 4g56-a1-m1-cA 604 29 0.1471 0.0166 0.3448 5.8 4g56-a1-m2-cC_4g56-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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