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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
KYVKLNVGGALYYTTMQTLTKQDTMLKAMLSGRMEVLTDSEGWILIDRCGKHFGTILNYL
RDGAVPLPESRREIEELLAEAKYYLVQGLVEECQAAL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5fta-a1-m1-cB 101 97 1.0000 0.9604 1.0000 1.03e-68 5fta-a1-m1-cD_5fta-a1-m1-cB
2 5fta-a1-m1-cA 101 97 1.0000 0.9604 1.0000 1.03e-68 5fta-a1-m1-cD_5fta-a1-m1-cA
3 5fta-a1-m1-cD 99 97 1.0000 0.9798 1.0000 1.67e-68 5fta-a1-m1-cC_5fta-a1-m1-cD, 5fta-a1-m1-cD_5fta-a1-m1-cA, 5fta-a1-m1-cD_5fta-a1-m1-cB
4 5fta-a1-m1-cC 97 97 1.0000 1.0000 1.0000 1.73e-68 5fta-a1-m1-cC_5fta-a1-m1-cD
5 4zgc-a1-m1-cB 373 89 0.3814 0.0992 0.4157 2.40e-16 4zgc-a1-m1-cA_4zgc-a1-m1-cB
6 4zgc-a1-m1-cA 372 89 0.3402 0.0887 0.3708 5.24e-12 4zgc-a1-m1-cA_4zgc-a1-m1-cB
7 3drz-a1-m1-cE 97 91 0.3608 0.3608 0.3846 1.02e-11 3drz-a1-m1-cD_3drz-a1-m1-cE
8 3drz-a1-m1-cD 95 91 0.3505 0.3579 0.3736 3.77e-11 3drz-a1-m1-cD_3drz-a1-m1-cE
9 5bxh-a1-m1-cE 97 98 0.3402 0.3402 0.3367 6.42e-11 5bxh-a1-m1-cE_5bxh-a1-m1-cC
10 5bxh-a1-m1-cC 99 98 0.3402 0.3333 0.3367 6.87e-11 5bxh-a1-m1-cE_5bxh-a1-m1-cC
11 4ua1-a1-m1-cB 125 27 0.1237 0.0960 0.4444 4.0 4ua1-a1-m1-cA_4ua1-a1-m1-cB
12 7m6l-a1-m1-cI 4299 54 0.1443 0.0033 0.2593 5.3 7m6l-a1-m1-cG_7m6l-a1-m1-cI
13 7m6l-a1-m1-cG 4299 54 0.1443 0.0033 0.2593 5.3 7m6l-a1-m1-cG_7m6l-a1-m1-cI
14 7m6a-a1-m1-cI 4306 54 0.1443 0.0033 0.2593 5.3 7m6a-a1-m1-cG_7m6a-a1-m1-cI
15 7m6a-a1-m1-cG 4306 54 0.1443 0.0033 0.2593 5.3 7m6a-a1-m1-cG_7m6a-a1-m1-cI
16 4dj2-a2-m1-cD 246 34 0.1340 0.0528 0.3824 6.8 4dj2-a2-m1-cD_4dj2-a2-m1-cB
17 4ua1-a1-m1-cA 124 26 0.1237 0.0968 0.4615 6.8 4ua1-a1-m1-cA_4ua1-a1-m1-cB
18 8dve-a1-m1-cG 3944 31 0.0928 0.0023 0.2903 9.5 8dve-a1-m1-cJ_8dve-a1-m1-cG
19 8duj-a1-m1-cG 3933 31 0.0928 0.0023 0.2903 9.6 8duj-a1-m1-cA_8duj-a1-m1-cG
20 8dve-a1-m1-cJ 3943 31 0.0928 0.0023 0.2903 9.6 8dve-a1-m1-cJ_8dve-a1-m1-cG
21 8duj-a1-m1-cA 3823 31 0.0928 0.0024 0.2903 9.8 8duj-a1-m1-cA_8duj-a1-m1-cG
22 3j8h-a1-m1-cG 3660 31 0.0928 0.0025 0.2903 9.9 3j8h-a1-m1-cE_3j8h-a1-m1-cG
23 3j8h-a1-m1-cE 3660 31 0.0928 0.0025 0.2903 9.9 3j8h-a1-m1-cE_3j8h-a1-m1-cG

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Reference:
Jacob Schwartz et al.

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