Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
LAAKEAKLRDLEDSLARERDTSWRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDME
IHAYRKLLEGEEER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3v4q-a2-m2-cA 74 74 1.0000 1.0000 1.0000 1.19e-44 3v4q-a2-m1-cA_3v4q-a2-m2-cA
2 3v4q-a2-m1-cA 74 74 1.0000 1.0000 1.0000 1.19e-44 3v4q-a2-m1-cA_3v4q-a2-m2-cA
3 3tyy-a1-m1-cA 75 66 0.6081 0.6000 0.6818 9.55e-26 3tyy-a1-m1-cB_3tyy-a1-m1-cA
4 3tyy-a1-m1-cB 71 64 0.5811 0.6056 0.6719 1.26e-24 3tyy-a1-m1-cB_3tyy-a1-m1-cA
5 2xv5-a1-m1-cB 53 55 0.6216 0.8679 0.8364 2.90e-20 2xv5-a1-m1-cA_2xv5-a1-m1-cB
6 2xv5-a1-m1-cA 53 55 0.6216 0.8679 0.8364 2.90e-20 2xv5-a1-m1-cA_2xv5-a1-m1-cB
7 1gk4-a3-m1-cF 74 66 0.3649 0.3649 0.4091 3.12e-10 1gk4-a3-m1-cE_1gk4-a3-m1-cF
8 1gk4-a3-m1-cE 70 66 0.3649 0.3857 0.4091 3.14e-10 1gk4-a3-m1-cE_1gk4-a3-m1-cF
9 4zry-a1-m2-cA 110 42 0.2973 0.2000 0.5238 1.75e-07 4zry-a1-m1-cA_4zry-a1-m2-cA
10 4zry-a1-m1-cA 110 42 0.2973 0.2000 0.5238 1.75e-07 4zry-a1-m1-cA_4zry-a1-m2-cA
11 3tnu-a1-m2-cA 90 46 0.2838 0.2333 0.4565 2.42e-07 3tnu-a1-m1-cA_3tnu-a1-m2-cA
12 3tnu-a1-m1-cA 90 46 0.2838 0.2333 0.4565 2.42e-07 3tnu-a1-m1-cA_3tnu-a1-m2-cA
13 7x5d-a1-m2-cB 94 25 0.3108 0.2447 0.9200 4.59e-07 7x5d-a1-m2-cB_7x5d-a1-m1-cA, 7x5d-a1-m2-cB_7x5d-a1-m2-cA
14 7x5d-a1-m2-cA 99 25 0.3108 0.2323 0.9200 5.17e-07 7x5d-a1-m2-cB_7x5d-a1-m2-cA
15 7x5d-a1-m1-cA 99 25 0.3108 0.2323 0.9200 5.17e-07 7x5d-a1-m2-cB_7x5d-a1-m1-cA
16 1gk6-a1-m1-cA 55 24 0.2297 0.3091 0.7083 2.91e-05 1gk6-a1-m1-cB_1gk6-a1-m1-cA
17 1gk6-a1-m1-cB 52 22 0.2027 0.2885 0.6818 4.57e-04 1gk6-a1-m1-cB_1gk6-a1-m1-cA
18 3ot5-a6-m1-cD 371 34 0.1757 0.0350 0.3824 2.0 3ot5-a6-m1-cD_3ot5-a6-m3-cB
19 6sy1-a1-m1-cB 861 59 0.1622 0.0139 0.2034 8.0 6sy1-a1-m1-cA_6sy1-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600