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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=56)
LAAVSVDCSEYPKPACPKDYRPVCGSDNKTYSNKCNFCNAVVESNGTLTLNHFGKC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1ovo-a3-m5-cD 56 56 1.0000 1.0000 1.0000 1.21e-36 1ovo-a3-m3-cD_1ovo-a3-m5-cD
2 1ovo-a3-m3-cD 56 56 1.0000 1.0000 1.0000 1.21e-36 1ovo-a3-m3-cD_1ovo-a3-m5-cD
3 1ovo-a2-m5-cC 56 56 1.0000 1.0000 1.0000 1.21e-36 1ovo-a2-m4-cC_1ovo-a2-m5-cC
4 1ovo-a2-m4-cC 56 56 1.0000 1.0000 1.0000 1.21e-36 1ovo-a2-m4-cC_1ovo-a2-m5-cC
5 4ovo-a2-m4-cA 56 56 0.8929 0.8929 0.8929 8.69e-33 4ovo-a2-m2-cA_4ovo-a2-m4-cA, 4ovo-a2-m3-cA_4ovo-a2-m4-cA
6 4ovo-a2-m3-cA 56 56 0.8929 0.8929 0.8929 8.69e-33 4ovo-a2-m3-cA_4ovo-a2-m4-cA
7 4ovo-a2-m2-cA 56 56 0.8929 0.8929 0.8929 8.69e-33 4ovo-a2-m2-cA_4ovo-a2-m4-cA
8 3hh2-a1-m1-cD 275 35 0.2679 0.0545 0.4286 0.014 3hh2-a1-m1-cD_3hh2-a1-m1-cC
9 3hh2-a1-m1-cD 275 35 0.2500 0.0509 0.4000 0.015 3hh2-a1-m1-cD_3hh2-a1-m1-cC
10 3hh2-a1-m1-cD 275 41 0.2500 0.0509 0.3415 2.4 3hh2-a1-m1-cD_3hh2-a1-m1-cC
11 3hh2-a1-m1-cC 278 35 0.2679 0.0540 0.4286 0.016 3hh2-a1-m1-cD_3hh2-a1-m1-cC
12 3hh2-a1-m1-cC 278 35 0.2500 0.0504 0.4000 0.016 3hh2-a1-m1-cD_3hh2-a1-m1-cC
13 3hh2-a1-m1-cC 278 41 0.2679 0.0540 0.3659 0.41 3hh2-a1-m1-cD_3hh2-a1-m1-cC
14 7kbu-a1-m1-cB 192 48 0.3214 0.0938 0.3750 0.026 7kbu-a1-m1-cB_7kbu-a1-m1-cA
15 7kbu-a1-m1-cA 221 48 0.3214 0.0814 0.3750 0.027 7kbu-a1-m1-cB_7kbu-a1-m1-cA
16 6jza-a1-m2-cA 81 41 0.2500 0.1728 0.3415 0.028 6jza-a1-m1-cA_6jza-a1-m2-cA
17 6jza-a1-m1-cA 81 41 0.2500 0.1728 0.3415 0.028 6jza-a1-m1-cA_6jza-a1-m2-cA
18 1bmo-a1-m1-cB 233 48 0.2857 0.0687 0.3333 0.23 1bmo-a1-m1-cA_1bmo-a1-m1-cB
19 1bmo-a1-m1-cA 233 48 0.2857 0.0687 0.3333 0.23 1bmo-a1-m1-cA_1bmo-a1-m1-cB
20 2qyo-a1-m1-cA 353 29 0.2143 0.0340 0.4138 1.7 2qyo-a1-m1-cB_2qyo-a1-m1-cA
21 2qyo-a1-m1-cB 352 29 0.2143 0.0341 0.4138 1.8 2qyo-a1-m1-cB_2qyo-a1-m1-cA
22 3if0-a1-m2-cX 149 29 0.1964 0.0738 0.3793 1.8 3if0-a1-m1-cX_3if0-a1-m2-cX
23 3if0-a1-m1-cX 149 29 0.1964 0.0738 0.3793 1.8 3if0-a1-m1-cX_3if0-a1-m2-cX

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Reference:
Jacob Schwartz et al.

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