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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQ
KCLAVGMVKEVVRTDSLKGRRGRL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6l6l-a1-m1-cB 84 84 1.0000 1.0000 1.0000 1.50e-56 6l6l-a1-m1-cB_6l6l-a1-m1-cA
2 6l6l-a1-m1-cA 85 84 1.0000 0.9882 1.0000 1.54e-56 6l6l-a1-m1-cB_6l6l-a1-m1-cA
3 6fbq-a1-m1-cB 81 75 0.5595 0.5802 0.6267 3.95e-32 6fbq-a1-m1-cA_6fbq-a1-m1-cB
4 6fbq-a1-m1-cA 80 75 0.5595 0.5875 0.6267 4.89e-32 6fbq-a1-m1-cA_6fbq-a1-m1-cB
5 8ifo-a1-m1-cB 80 75 0.5476 0.5750 0.6133 1.20e-27 8ifo-a1-m1-cA_8ifo-a1-m1-cB
6 8ifo-a1-m1-cA 76 73 0.5357 0.5921 0.6164 9.44e-27 8ifo-a1-m1-cA_8ifo-a1-m1-cB
7 7xv6-a1-m1-cA 84 74 0.4881 0.4881 0.5541 1.28e-26 7xv6-a1-m1-cB_7xv6-a1-m1-cA
8 7xv9-a1-m1-cB 80 73 0.4881 0.5125 0.5616 1.80e-26 7xv9-a1-m1-cA_7xv9-a1-m1-cB
9 7xv9-a1-m1-cA 80 73 0.4881 0.5125 0.5616 1.80e-26 7xv9-a1-m1-cA_7xv9-a1-m1-cB
10 7xv6-a1-m1-cB 77 73 0.4881 0.5325 0.5616 2.09e-26 7xv6-a1-m1-cB_7xv6-a1-m1-cA
11 4oln-a1-m1-cA 70 68 0.4881 0.5857 0.6029 2.45e-23 4oln-a1-m1-cB_4oln-a1-m1-cA
12 4oln-a1-m1-cB 67 68 0.4881 0.6119 0.6029 3.63e-23 4oln-a1-m1-cB_4oln-a1-m1-cA
13 1hcq-a2-m1-cE 74 69 0.4524 0.5135 0.5507 1.92e-22 1hcq-a2-m1-cF_1hcq-a2-m1-cE
14 1hcq-a2-m1-cF 71 69 0.4524 0.5352 0.5507 6.44e-21 1hcq-a2-m1-cF_1hcq-a2-m1-cE
15 1r4i-a1-m1-cB 71 67 0.3690 0.4366 0.4627 5.32e-17 1r4i-a1-m1-cB_1r4i-a1-m1-cA
16 1r4i-a1-m1-cA 74 67 0.3690 0.4189 0.4627 5.49e-17 1r4i-a1-m1-cB_1r4i-a1-m1-cA
17 2c7a-a1-m1-cB 76 68 0.3929 0.4342 0.4853 1.37e-16 2c7a-a1-m1-cB_2c7a-a1-m1-cA
18 2c7a-a1-m1-cA 78 68 0.3929 0.4231 0.4853 1.43e-16 2c7a-a1-m1-cB_2c7a-a1-m1-cA
19 1ovl-a1-m1-cE 247 12 0.1429 0.0486 1.0000 0.75 1ovl-a1-m1-cB_1ovl-a1-m1-cE, 1ovl-a1-m1-cC_1ovl-a1-m1-cE, 1ovl-a1-m1-cD_1ovl-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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