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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
LDKLKEFGNTLEDKARELISRIKQSELSAKMREWFSETFQKVKEKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6nf3-a1-m2-cB 51 46 1.0000 0.9020 1.0000 9.02e-27 6nf3-a1-m1-cA_6nf3-a1-m2-cB
2 6dvu-a1-m2-cB 53 46 1.0000 0.8679 1.0000 9.45e-27 6dvu-a1-m1-cA_6dvu-a1-m2-cB
3 6dz6-a1-m1-cB 50 46 1.0000 0.9200 1.0000 9.83e-27 6dz6-a1-m1-cB_6dz6-a1-m1-cA
4 6dz6-a1-m1-cA 52 46 1.0000 0.8846 1.0000 9.97e-27 6dz6-a1-m1-cB_6dz6-a1-m1-cA
5 6dvu-a1-m1-cA 51 46 1.0000 0.9020 1.0000 1.01e-26 6dvu-a1-m1-cA_6dvu-a1-m2-cB
6 6nf3-a1-m1-cA 46 46 1.0000 1.0000 1.0000 1.41e-26 6nf3-a1-m1-cA_6nf3-a1-m2-cB
7 1nzc-a1-m1-cB 196 39 0.3043 0.0714 0.3590 2.9 1nzc-a1-m1-cA_1nzc-a1-m1-cB
8 1nzc-a1-m1-cA 196 39 0.3043 0.0714 0.3590 2.9 1nzc-a1-m1-cA_1nzc-a1-m1-cB
9 2fck-a1-m2-cA 171 25 0.2174 0.0585 0.4000 3.7 2fck-a1-m1-cA_2fck-a1-m2-cA
10 2fck-a1-m1-cA 171 25 0.2174 0.0585 0.4000 3.7 2fck-a1-m1-cA_2fck-a1-m2-cA
11 6oaw-a1-m1-cB 382 41 0.2826 0.0340 0.3171 4.3 6oaw-a1-m1-cA_6oaw-a1-m1-cB
12 6oaw-a1-m1-cA 379 29 0.2391 0.0290 0.3793 5.8 6oaw-a1-m1-cA_6oaw-a1-m1-cB
13 3drw-a1-m1-cA 460 20 0.1957 0.0196 0.4500 9.0 3drw-a1-m1-cB_3drw-a1-m1-cA
14 3kzp-a1-m1-cB 228 29 0.2609 0.0526 0.4138 9.3 3kzp-a1-m1-cA_3kzp-a1-m1-cB
15 3kzp-a1-m1-cA 228 29 0.2609 0.0526 0.4138 9.3 3kzp-a1-m1-cA_3kzp-a1-m1-cB
16 3drw-a1-m1-cB 450 20 0.1957 0.0200 0.4500 9.4 3drw-a1-m1-cB_3drw-a1-m1-cA
17 3kru-a1-m1-cC 334 19 0.1957 0.0269 0.4737 9.4 3kru-a1-m1-cC_3kru-a1-m1-cD
18 3kru-a1-m1-cD 335 19 0.1957 0.0269 0.4737 9.6 3kru-a1-m1-cB_3kru-a1-m1-cD, 3kru-a1-m1-cC_3kru-a1-m1-cD
19 3kru-a1-m1-cB 335 19 0.1957 0.0269 0.4737 9.6 3kru-a1-m1-cB_3kru-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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