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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=42)
LDKVLHCYQMKELFLFVTWSIDAVPMKYIREAYPLQVIEFFQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5xyw-a1-m1-cB 42 42 1.0000 1.0000 1.0000 4.40e-26 5xyw-a1-m1-cB_5xyw-a1-m1-cA
2 5xyw-a1-m1-cA 54 46 1.0000 0.7778 0.9130 4.92e-24 5xyw-a1-m1-cB_5xyw-a1-m1-cA
3 5xyv-a1-m1-cA 63 47 0.6905 0.4603 0.6170 3.71e-14 5xyv-a1-m1-cA_5xyv-a1-m1-cB
4 5xyv-a1-m1-cB 64 47 0.6905 0.4531 0.6170 4.01e-14 5xyv-a1-m1-cA_5xyv-a1-m1-cB
5 6ifa-a1-m1-cB 126 37 0.3810 0.1270 0.4324 0.028 6ifa-a1-m1-cA_6ifa-a1-m1-cB
6 6ifa-a1-m1-cA 126 37 0.3810 0.1270 0.4324 0.028 6ifa-a1-m1-cA_6ifa-a1-m1-cB
7 4q3k-a1-m2-cA 241 31 0.2619 0.0456 0.3548 5.2 4q3k-a1-m2-cA_4q3k-a1-m2-cB
8 4q3k-a1-m1-cA 241 31 0.2619 0.0456 0.3548 5.2 4q3k-a1-m1-cA_4q3k-a1-m2-cB
9 4q3k-a1-m2-cB 242 31 0.2619 0.0455 0.3548 5.4 4q3k-a1-m1-cA_4q3k-a1-m2-cB, 4q3k-a1-m2-cA_4q3k-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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