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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
LDPEERYEHQLRQLNDMGFFDFDRNVAALRRSGGSVQGALDSLLNG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2bwe-a2-m1-cO 46 46 1.0000 1.0000 1.0000 3.63e-28 2bwe-a2-m1-cP_2bwe-a2-m1-cO
2 2bwe-a2-m1-cP 44 44 0.9565 1.0000 1.0000 8.33e-27 2bwe-a2-m1-cP_2bwe-a2-m1-cO
3 6c2z-a1-m2-cA 345 42 0.3261 0.0435 0.3571 0.34 6c2z-a1-m1-cA_6c2z-a1-m2-cA
4 6c2z-a1-m1-cA 345 42 0.3261 0.0435 0.3571 0.34 6c2z-a1-m1-cA_6c2z-a1-m2-cA
5 5vj0-a2-m1-cC 298 17 0.1957 0.0302 0.5294 3.5 5vj0-a2-m1-cC_5vj0-a2-m1-cD
6 5vj0-a2-m1-cD 300 17 0.1957 0.0300 0.5294 3.5 5vj0-a2-m1-cC_5vj0-a2-m1-cD
7 6fiy-a1-m1-cB 303 17 0.1957 0.0297 0.5294 5.8 6fiy-a1-m1-cA_6fiy-a1-m1-cB
8 6fiy-a1-m1-cA 299 17 0.1957 0.0301 0.5294 5.9 6fiy-a1-m1-cA_6fiy-a1-m1-cB
9 5xfr-a1-m1-cB 298 12 0.1957 0.0302 0.7500 7.4 5xfr-a1-m1-cB_5xfr-a1-m1-cA
10 5xfr-a1-m1-cA 309 12 0.1957 0.0291 0.7500 7.4 5xfr-a1-m1-cB_5xfr-a1-m1-cA
11 1du5-a1-m1-cB 206 19 0.1739 0.0388 0.4211 7.5 1du5-a1-m1-cA_1du5-a1-m1-cB
12 1du5-a1-m1-cA 206 19 0.1739 0.0388 0.4211 7.5 1du5-a1-m1-cA_1du5-a1-m1-cB
13 2hek-a1-m2-cB 369 13 0.1739 0.0217 0.6154 9.3 2hek-a1-m1-cA_2hek-a1-m2-cB, 2hek-a1-m2-cA_2hek-a1-m2-cB
14 2hek-a1-m2-cA 369 13 0.1739 0.0217 0.6154 9.3 2hek-a1-m2-cA_2hek-a1-m2-cB
15 2hek-a1-m1-cA 369 13 0.1739 0.0217 0.6154 9.3 2hek-a1-m1-cA_2hek-a1-m2-cB
16 5v8k-a1-m2-cA 600 34 0.2609 0.0200 0.3529 10.0 5v8k-a1-m1-cA_5v8k-a1-m2-cA
17 5v8k-a1-m1-cA 600 34 0.2609 0.0200 0.3529 10.0 5v8k-a1-m1-cA_5v8k-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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