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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
LDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLKIYKKDFSSRLGLLKLVGQ
RKRLLSYLKRKDYNSYSKLITELNL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4iyl-a3-m4-cA 85 85 1.0000 1.0000 1.0000 7.82e-56 4iyl-a3-m1-cA_4iyl-a3-m4-cA, 4iyl-a3-m3-cA_4iyl-a3-m4-cA
2 4iyl-a3-m3-cA 85 85 1.0000 1.0000 1.0000 7.82e-56 4iyl-a3-m3-cA_4iyl-a3-m4-cA
3 4iyl-a3-m1-cA 85 85 1.0000 1.0000 1.0000 7.82e-56 4iyl-a3-m1-cA_4iyl-a3-m4-cA
4 1au1-a1-m1-cB 163 88 0.3176 0.1656 0.3068 0.15 1au1-a1-m1-cB_1au1-a1-m1-cA
5 1au1-a1-m1-cA 166 88 0.3176 0.1627 0.3068 0.17 1au1-a1-m1-cB_1au1-a1-m1-cA
6 3afo-a1-m2-cB 341 40 0.1882 0.0469 0.4000 0.19 3afo-a1-m1-cB_3afo-a1-m2-cB, 3afo-a1-m2-cB_3afo-a1-m1-cA, 3afo-a1-m2-cB_3afo-a1-m2-cA
7 3afo-a1-m1-cB 341 40 0.1882 0.0469 0.4000 0.19 3afo-a1-m1-cB_3afo-a1-m2-cB
8 3afo-a1-m2-cA 360 40 0.1882 0.0444 0.4000 0.20 3afo-a1-m2-cB_3afo-a1-m2-cA
9 3afo-a1-m1-cA 360 40 0.1882 0.0444 0.4000 0.20 3afo-a1-m2-cB_3afo-a1-m1-cA
10 6rl5-a2-m1-cH 417 47 0.1765 0.0360 0.3191 3.4 6rl5-a2-m1-cH_6rl5-a2-m1-cE, 6rl5-a2-m1-cH_6rl5-a2-m1-cG
11 6rl5-a2-m1-cE 418 47 0.1765 0.0359 0.3191 3.4 6rl5-a2-m1-cH_6rl5-a2-m1-cE
12 6rl5-a2-m1-cG 422 47 0.1765 0.0355 0.3191 3.5 6rl5-a2-m1-cH_6rl5-a2-m1-cG
13 6pnl-a1-m2-cA 334 49 0.2000 0.0509 0.3469 3.6 6pnl-a1-m1-cA_6pnl-a1-m2-cA
14 6pnl-a1-m1-cA 334 49 0.2000 0.0509 0.3469 3.6 6pnl-a1-m1-cA_6pnl-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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