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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
LDSLLENLRAEIDALDNELSDLLDKRLEIALKIALIKQESPIYCPKREQEILKRLSQRDF
KHLNGEILTGFYTEVFKISRKFQENALKELK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6al9-a1-m1-cB 91 91 1.0000 1.0000 1.0000 2.34e-60 6al9-a1-m1-cA_6al9-a1-m1-cB
2 6al9-a1-m1-cA 90 90 0.9890 1.0000 1.0000 7.04e-60 6al9-a1-m1-cA_6al9-a1-m1-cB
3 1ybz-a2-m2-cA 76 57 0.3077 0.3684 0.4912 1.34e-07 1ybz-a2-m1-cA_1ybz-a2-m2-cA
4 1ybz-a2-m1-cA 76 57 0.3077 0.3684 0.4912 1.34e-07 1ybz-a2-m1-cA_1ybz-a2-m2-cA
5 2d8d-a1-m1-cA 80 77 0.2637 0.3000 0.3117 3.84e-05 2d8d-a1-m1-cA_2d8d-a1-m1-cB
6 2d8d-a1-m1-cB 83 77 0.2637 0.2892 0.3117 4.25e-05 2d8d-a1-m1-cA_2d8d-a1-m1-cB
7 5j6f-a1-m2-cB 340 91 0.2967 0.0794 0.2967 0.002 5j6f-a1-m1-cB_5j6f-a1-m2-cB, 5j6f-a1-m2-cB_5j6f-a1-m1-cA, 5j6f-a1-m2-cB_5j6f-a1-m2-cA
8 5j6f-a1-m1-cB 340 91 0.2967 0.0794 0.2967 0.002 5j6f-a1-m1-cB_5j6f-a1-m2-cB
9 5j6f-a1-m2-cA 352 83 0.2637 0.0682 0.2892 0.004 5j6f-a1-m2-cB_5j6f-a1-m2-cA
10 5j6f-a1-m1-cA 352 83 0.2637 0.0682 0.2892 0.004 5j6f-a1-m2-cB_5j6f-a1-m1-cA
11 1ecm-a2-m1-cA 91 85 0.2747 0.2747 0.2941 0.11 1ecm-a2-m1-cA_1ecm-a2-m1-cB
12 1ecm-a2-m1-cB 95 85 0.2747 0.2632 0.2941 0.12 1ecm-a2-m1-cA_1ecm-a2-m1-cB
13 1ecm-a1-m2-cB 95 85 0.2747 0.2632 0.2941 0.12 1ecm-a1-m1-cB_1ecm-a1-m2-cB
14 1ecm-a1-m1-cB 95 85 0.2747 0.2632 0.2941 0.12 1ecm-a1-m1-cB_1ecm-a1-m2-cB
15 3tfc-a1-m2-cA 343 77 0.2308 0.0612 0.2727 0.29 3tfc-a1-m1-cA_3tfc-a1-m2-cA, 3tfc-a1-m2-cB_3tfc-a1-m2-cA
16 3tfc-a1-m1-cA 343 77 0.2308 0.0612 0.2727 0.29 3tfc-a1-m1-cA_3tfc-a1-m2-cA, 3tfc-a1-m2-cB_3tfc-a1-m1-cA
17 8dsa-a1-m1-cC 320 60 0.1978 0.0563 0.3000 1.9 8dsa-a1-m1-cB_8dsa-a1-m1-cC
18 5yvq-a1-m3-cA 358 28 0.1209 0.0307 0.3929 4.4 5yvq-a1-m2-cA_5yvq-a1-m3-cA
19 5yvq-a1-m2-cA 358 28 0.1209 0.0307 0.3929 4.4 5yvq-a1-m2-cA_5yvq-a1-m3-cA
20 3o4z-a6-m1-cD 572 33 0.1429 0.0227 0.3939 4.6 3o4z-a6-m1-cB_3o4z-a6-m1-cD
21 3o4z-a6-m1-cB 572 33 0.1429 0.0227 0.3939 4.6 3o4z-a6-m1-cB_3o4z-a6-m1-cD
22 4afl-a3-m1-cE 96 48 0.2088 0.1979 0.3958 6.6 4afl-a3-m1-cD_4afl-a3-m1-cE

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Reference:
Jacob Schwartz et al.

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