Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=40)
LEEELKQLEEELQAIEEQLAQLQWKAQARKEKLAQLKEKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7a4d-a2-m1-cL 40 40 1.0000 1.0000 1.0000 3.98e-17 7a4d-a2-m1-cK_7a4d-a2-m1-cL
2 7a4d-a2-m1-cK 40 40 1.0000 1.0000 1.0000 3.98e-17 7a4d-a2-m1-cK_7a4d-a2-m1-cL
3 7a48-a1-m2-cB 40 40 1.0000 1.0000 1.0000 3.98e-17 7a48-a1-m1-cB_7a48-a1-m2-cB
4 7a48-a1-m1-cB 40 40 1.0000 1.0000 1.0000 3.98e-17 7a48-a1-m1-cB_7a48-a1-m2-cB
5 6x1i-a1-m6-cA 171 29 0.4250 0.0994 0.5862 0.034 6x1i-a1-m5-cA_6x1i-a1-m6-cA
6 6x1i-a1-m5-cA 171 29 0.4250 0.0994 0.5862 0.034 6x1i-a1-m5-cA_6x1i-a1-m6-cA
7 3tq2-a1-m3-cA 35 31 0.3500 0.4000 0.4516 0.036 3tq2-a1-m2-cA_3tq2-a1-m3-cA
8 3tq2-a1-m2-cA 35 31 0.3500 0.4000 0.4516 0.036 3tq2-a1-m2-cA_3tq2-a1-m3-cA
9 1g6u-a2-m3-cB 48 28 0.4250 0.3542 0.6071 0.096 1g6u-a2-m1-cA_1g6u-a2-m3-cB, 1g6u-a2-m3-cA_1g6u-a2-m3-cB
10 1g6u-a2-m3-cA 48 28 0.4250 0.3542 0.6071 0.096 1g6u-a2-m3-cA_1g6u-a2-m3-cB
11 1g6u-a2-m1-cA 48 28 0.4250 0.3542 0.6071 0.096 1g6u-a2-m1-cA_1g6u-a2-m3-cB
12 3gaa-a1-m2-cE 243 27 0.3250 0.0535 0.4815 0.12 3gaa-a1-m1-cD_3gaa-a1-m2-cE, 3gaa-a1-m2-cD_3gaa-a1-m2-cE
13 3gaa-a1-m1-cA 243 27 0.3250 0.0535 0.4815 0.12 3gaa-a1-m2-cD_3gaa-a1-m1-cA
14 3gaa-a1-m2-cD 242 27 0.3250 0.0537 0.4815 0.13 3gaa-a1-m2-cD_3gaa-a1-m1-cA, 3gaa-a1-m2-cD_3gaa-a1-m2-cE
15 3gaa-a1-m1-cD 242 27 0.3250 0.0537 0.4815 0.13 3gaa-a1-m1-cD_3gaa-a1-m2-cE
16 6x1i-a1-m6-cB 146 21 0.3250 0.0890 0.6190 0.55 6x1i-a1-m2-cB_6x1i-a1-m6-cB
17 6x1i-a1-m2-cB 146 21 0.3250 0.0890 0.6190 0.55 6x1i-a1-m2-cB_6x1i-a1-m6-cB
18 7qdk-a1-m1-cC 29 27 0.3500 0.4828 0.5185 0.83 7qdk-a1-m1-cB_7qdk-a1-m1-cC
19 7qdk-a1-m1-cB 29 27 0.3500 0.4828 0.5185 0.83 7qdk-a1-m1-cB_7qdk-a1-m1-cC
20 1jun-a1-m1-cB 43 36 0.3000 0.2791 0.3333 4.6 1jun-a1-m1-cA_1jun-a1-m1-cB
21 1jun-a1-m1-cA 43 36 0.3000 0.2791 0.3333 4.6 1jun-a1-m1-cA_1jun-a1-m1-cB
22 1pix-a2-m2-cB 586 36 0.4250 0.0290 0.4722 4.7 1pix-a2-m1-cA_1pix-a2-m2-cB, 1pix-a2-m1-cB_1pix-a2-m2-cB, 1pix-a2-m2-cA_1pix-a2-m2-cB
23 1pix-a2-m2-cA 586 36 0.4250 0.0290 0.4722 4.7 1pix-a2-m2-cA_1pix-a2-m2-cB
24 1pix-a2-m1-cB 586 36 0.4250 0.0290 0.4722 4.7 1pix-a2-m1-cB_1pix-a2-m2-cB
25 1pix-a2-m1-cA 586 36 0.4250 0.0290 0.4722 4.7 1pix-a2-m1-cA_1pix-a2-m2-cB
26 5t01-a1-m1-cB 62 38 0.3250 0.2097 0.3421 5.4 5t01-a1-m1-cA_5t01-a1-m1-cB
27 5t01-a1-m1-cA 62 38 0.3250 0.2097 0.3421 5.4 5t01-a1-m1-cA_5t01-a1-m1-cB
28 3qh9-a1-m2-cA 66 37 0.3250 0.1970 0.3514 8.4 3qh9-a1-m1-cA_3qh9-a1-m2-cA
29 3qh9-a1-m1-cA 66 37 0.3250 0.1970 0.3514 8.4 3qh9-a1-m1-cA_3qh9-a1-m2-cA
30 4uwe-a1-m1-cD 3322 25 0.3000 0.0036 0.4800 9.2 4uwe-a1-m1-cC_4uwe-a1-m1-cD
31 4uwe-a1-m1-cC 3322 25 0.3000 0.0036 0.4800 9.2 4uwe-a1-m1-cC_4uwe-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600