HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=85)
LERPKLYKVMLLNDDYTPREFVTVVLKAVFRMSEDTGRRVMMTAHRFGSAVVVVCERDIA
ETKAKEATDLGKEAGFPLMFTTEPE

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	4yjm-a5-m3-cA	85	85	1.0000	1.0000	1.0000	1.93e-58	4yjm-a5-m1-cB_4yjm-a5-m3-cA, 4yjm-a5-m2-cC_4yjm-a5-m3-cA
2	4yjm-a5-m2-cC	83	83	0.9765	1.0000	1.0000	3.84e-57	4yjm-a5-m2-cC_4yjm-a5-m3-cA
3	4yjm-a5-m1-cB	84	83	0.9765	0.9881	1.0000	4.14e-57	4yjm-a5-m1-cB_4yjm-a5-m3-cA
4	3g1b-a1-m1-cB	81	81	0.3765	0.3951	0.3951	7.79e-16	3g1b-a1-m1-cA_3g1b-a1-m1-cB
5	3g1b-a1-m1-cA	80	80	0.3765	0.4000	0.4000	8.29e-16	3g1b-a1-m1-cA_3g1b-a1-m1-cB
6	3o2o-a7-m1-cH	85	83	0.3765	0.3765	0.3855	9.81e-15	3o2o-a7-m1-cG_3o2o-a7-m1-cH
7	3o2o-a7-m1-cG	85	83	0.3765	0.3765	0.3855	9.81e-15	3o2o-a7-m1-cG_3o2o-a7-m1-cH
8	3o2o-a6-m1-cG	85	83	0.3765	0.3765	0.3855	9.81e-15	3o2o-a6-m1-cF_3o2o-a6-m1-cG
9	3o2o-a6-m1-cF	85	83	0.3765	0.3765	0.3855	9.81e-15	3o2o-a6-m1-cF_3o2o-a6-m1-cG
10	7d34-a1-m1-cB	79	80	0.3176	0.3418	0.3375	1.65e-08	7d34-a1-m1-cA_7d34-a1-m1-cB
11	7d34-a1-m1-cA	79	80	0.3176	0.3418	0.3375	1.65e-08	7d34-a1-m1-cA_7d34-a1-m1-cB
12	4otm-a1-m1-cB	118	52	0.1529	0.1102	0.2500	0.21	4otm-a1-m1-cA_4otm-a1-m1-cB
13	4otm-a1-m1-cA	114	52	0.1529	0.1140	0.2500	0.22	4otm-a1-m1-cA_4otm-a1-m1-cB
14	4en4-a1-m1-cB	310	52	0.2000	0.0548	0.3269	0.71	4en4-a1-m1-cA_4en4-a1-m1-cB
15	4en4-a1-m1-cA	310	52	0.2000	0.0548	0.3269	0.71	4en4-a1-m1-cA_4en4-a1-m1-cB
16	2yxt-a2-m2-cB	304	52	0.2000	0.0559	0.3269	0.72	2yxt-a2-m1-cB_2yxt-a2-m2-cB
17	2yxt-a2-m1-cB	304	52	0.2000	0.0559	0.3269	0.72	2yxt-a2-m1-cB_2yxt-a2-m2-cB
18	2p0u-a1-m1-cA	402	27	0.1412	0.0299	0.4444	2.4	2p0u-a1-m1-cB_2p0u-a1-m1-cA
19	2pa6-a2-m4-cB	427	49	0.2118	0.0422	0.3673	2.8	2pa6-a2-m1-cA_2pa6-a2-m4-cB, 2pa6-a2-m2-cB_2pa6-a2-m4-cB, 2pa6-a2-m4-cA_2pa6-a2-m4-cB
20	2pa6-a2-m4-cA	427	49	0.2118	0.0422	0.3673	2.8	2pa6-a2-m4-cA_2pa6-a2-m4-cB
21	2pa6-a2-m2-cB	427	49	0.2118	0.0422	0.3673	2.8	2pa6-a2-m2-cB_2pa6-a2-m4-cB
22	2pa6-a2-m1-cA	427	49	0.2118	0.0422	0.3673	2.8	2pa6-a2-m1-cA_2pa6-a2-m4-cB
23	4p62-a1-m2-cA	269	65	0.2471	0.0781	0.3231	2.8	4p62-a1-m1-cA_4p62-a1-m2-cA
24	4p62-a1-m1-cA	269	65	0.2471	0.0781	0.3231	2.8	4p62-a1-m1-cA_4p62-a1-m2-cA
25	2p0u-a1-m1-cB	398	27	0.1412	0.0302	0.4444	2.9	2p0u-a1-m1-cB_2p0u-a1-m1-cA
26	4nar-a2-m2-cA	411	45	0.1529	0.0316	0.2889	6.8	4nar-a2-m1-cA_4nar-a2-m2-cA
27	4nar-a2-m1-cA	411	45	0.1529	0.0316	0.2889	6.8	4nar-a2-m1-cA_4nar-a2-m2-cA
28	3b97-a2-m1-cD	431	33	0.1529	0.0302	0.3939	8.3	3b97-a2-m1-cD_3b97-a2-m1-cC
29	1vgv-a2-m1-cC	358	30	0.1294	0.0307	0.3667	8.3	1vgv-a2-m1-cC_1vgv-a2-m1-cD
30	3b97-a2-m1-cC	433	33	0.1529	0.0300	0.3939	8.4	3b97-a2-m1-cD_3b97-a2-m1-cC

[Back]

Reference:
Jacob Schwartz et al.