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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=71)
LETIMASPLNQQSLGLLIKERRKSAALTQDVAAMLCGVTKKTLIRVEKGEDVYISTVFKI
LDGLGIDIVSA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4pu7-a1-m1-cA 71 71 1.0000 1.0000 1.0000 3.42e-46 4pu7-a1-m1-cB_4pu7-a1-m1-cA
2 4pu7-a1-m1-cB 64 64 0.9014 1.0000 1.0000 3.63e-41 4pu7-a1-m1-cB_4pu7-a1-m1-cA
3 1y9q-a1-m2-cA 173 48 0.2958 0.1214 0.4375 0.006 1y9q-a1-m1-cA_1y9q-a1-m2-cA
4 1y9q-a1-m1-cA 173 48 0.2958 0.1214 0.4375 0.006 1y9q-a1-m1-cA_1y9q-a1-m2-cA
5 4ghj-a1-m1-cA 71 39 0.1831 0.1831 0.3333 0.25 4ghj-a1-m1-cA_4ghj-a1-m1-cB
6 4ghj-a1-m1-cB 74 38 0.1831 0.1757 0.3421 0.28 4ghj-a1-m1-cA_4ghj-a1-m1-cB
7 5jub-a1-m1-cA 298 44 0.2394 0.0570 0.3864 0.47 5jub-a1-m1-cB_5jub-a1-m1-cA
8 5jub-a1-m1-cB 294 41 0.2113 0.0510 0.3659 0.96 5jub-a1-m1-cB_5jub-a1-m1-cA
9 7p4a-a1-m2-cA 241 58 0.2113 0.0622 0.2586 2.7 7p4a-a1-m1-cB_7p4a-a1-m2-cA, 7p4a-a1-m2-cB_7p4a-a1-m2-cA
10 7p4a-a1-m1-cA 241 58 0.2113 0.0622 0.2586 2.7 7p4a-a1-m2-cB_7p4a-a1-m1-cA
11 5f07-a1-m2-cA 212 25 0.1268 0.0425 0.3600 4.4 5f07-a1-m1-cA_5f07-a1-m2-cA
12 5f07-a1-m1-cA 212 25 0.1268 0.0425 0.3600 4.4 5f07-a1-m1-cA_5f07-a1-m2-cA
13 3cro-a1-m1-cR 64 58 0.2394 0.2656 0.2931 5.7 3cro-a1-m1-cR_3cro-a1-m1-cL
14 2cro-a1-m3-cA 65 58 0.2394 0.2615 0.2931 5.9 2cro-a1-m2-cA_2cro-a1-m3-cA
15 2cro-a1-m2-cA 65 58 0.2394 0.2615 0.2931 5.9 2cro-a1-m2-cA_2cro-a1-m3-cA
16 3cro-a1-m1-cL 66 58 0.2394 0.2576 0.2931 6.1 3cro-a1-m1-cR_3cro-a1-m1-cL
17 4p52-a2-m3-cA 308 59 0.2676 0.0617 0.3220 6.5 4p52-a2-m1-cA_4p52-a2-m3-cA
18 4p52-a2-m1-cA 308 59 0.2676 0.0617 0.3220 6.5 4p52-a2-m1-cA_4p52-a2-m3-cA
19 4p52-a1-m2-cA 308 59 0.2676 0.0617 0.3220 6.5 4p52-a1-m1-cA_4p52-a1-m2-cA
20 4p52-a1-m1-cA 308 59 0.2676 0.0617 0.3220 6.5 4p52-a1-m1-cA_4p52-a1-m2-cA
21 3gn5-a1-m1-cB 130 43 0.2113 0.1154 0.3488 6.5 3gn5-a1-m1-cB_3gn5-a1-m1-cA
22 3now-a2-m3-cA 786 59 0.2254 0.0204 0.2712 9.1 3now-a2-m2-cA_3now-a2-m3-cA
23 3now-a2-m2-cA 786 59 0.2254 0.0204 0.2712 9.1 3now-a2-m2-cA_3now-a2-m3-cA

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Reference:
Jacob Schwartz et al.

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