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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=47)
LFSDVQDIKTALAKIHEDNQKIISKLESLLLLKGEVESIKKQINRQN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4c5q-a2-m1-cG 47 47 1.0000 1.0000 1.0000 8.14e-27 4c5q-a2-m1-cG_4c5q-a2-m1-cH
2 4c5q-a2-m1-cH 51 47 1.0000 0.9216 1.0000 9.73e-27 4c5q-a2-m1-cG_4c5q-a2-m1-cH
3 4bhv-a1-m1-cA 57 47 1.0000 0.8246 1.0000 1.04e-26 4bhv-a1-m1-cA_4bhv-a1-m1-cD
4 4bhv-a1-m1-cD 58 47 1.0000 0.8103 1.0000 1.04e-26 4bhv-a1-m1-cA_4bhv-a1-m1-cD
5 3ke3-a1-m2-cA 362 17 0.2128 0.0276 0.5882 5.7 3ke3-a1-m1-cA_3ke3-a1-m2-cA
6 3ke3-a1-m1-cA 362 17 0.2128 0.0276 0.5882 5.7 3ke3-a1-m1-cA_3ke3-a1-m2-cA
7 5nks-a1-m4-cA 490 34 0.2553 0.0245 0.3529 8.0 5nks-a1-m1-cA_5nks-a1-m4-cA, 5nks-a1-m3-cA_5nks-a1-m4-cA
8 5nks-a1-m3-cA 490 34 0.2553 0.0245 0.3529 8.0 5nks-a1-m3-cA_5nks-a1-m4-cA
9 5nks-a1-m1-cA 490 34 0.2553 0.0245 0.3529 8.0 5nks-a1-m1-cA_5nks-a1-m4-cA
10 4le2-a4-m1-cC 134 33 0.2553 0.0896 0.3636 8.6 4le2-a4-m2-cD_4le2-a4-m1-cC
11 4le1-a3-m1-cB 130 33 0.2553 0.0923 0.3636 9.0 4le1-a3-m1-cB_4le1-a3-m2-cA
12 4le1-a3-m2-cA 132 33 0.2553 0.0909 0.3636 9.1 4le1-a3-m1-cB_4le1-a3-m2-cA

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Reference:
Jacob Schwartz et al.

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