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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
LGGAILAEVIGTTLMKFSEGFTRLWPSVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGV
GIVLISLLSWGFFGQRLDLPAIIGMML

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3b61-a2-m1-cD 107 87 1.0000 0.8131 1.0000 4.47e-57 3b61-a2-m1-cC_3b61-a2-m1-cD
2 3b61-a2-m1-cC 107 87 1.0000 0.8131 1.0000 4.47e-57 3b61-a2-m1-cC_3b61-a2-m1-cD
3 3b62-a1-m1-cB 87 87 1.0000 1.0000 1.0000 4.61e-57 3b62-a1-m1-cB_3b62-a1-m1-cA
4 3b62-a1-m1-cA 95 87 1.0000 0.9158 1.0000 4.67e-57 3b62-a1-m1-cB_3b62-a1-m1-cA
5 7sfq-a1-m1-cB 102 87 0.9885 0.8431 0.9885 3.05e-56 7sfq-a1-m1-cA_7sfq-a1-m1-cB
6 7sfq-a1-m1-cA 102 87 0.9885 0.8431 0.9885 3.05e-56 7sfq-a1-m1-cA_7sfq-a1-m1-cB
7 2i68-a1-m1-cB 78 87 0.7356 0.8205 0.7356 1.32e-28 2i68-a1-m1-cA_2i68-a1-m1-cB
8 2i68-a1-m1-cA 78 87 0.7356 0.8205 0.7356 1.32e-28 2i68-a1-m1-cA_2i68-a1-m1-cB
9 6wk8-a1-m1-cB 104 80 0.3793 0.3173 0.4125 1.33e-11 6wk8-a1-m1-cA_6wk8-a1-m1-cB
10 6wk8-a1-m1-cA 104 80 0.3793 0.3173 0.4125 1.33e-11 6wk8-a1-m1-cA_6wk8-a1-m1-cB
11 5sy1-a1-m1-cB 582 87 0.2874 0.0430 0.2874 1.5 5sy1-a1-m1-cA_5sy1-a1-m1-cB
12 5sy1-a1-m1-cA 582 87 0.2874 0.0430 0.2874 1.5 5sy1-a1-m1-cA_5sy1-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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