Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=85)
LGGLKQAQQQEKQKQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLEDDKELEDL
IAAAFNDAVRRAEELQKEKASVTAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1j8b-a1-m2-cA 85 85 1.0000 1.0000 1.0000 3.25e-56 1j8b-a1-m1-cA_1j8b-a1-m2-cA
2 1j8b-a1-m1-cA 85 85 1.0000 1.0000 1.0000 3.25e-56 1j8b-a1-m1-cA_1j8b-a1-m2-cA
3 1pug-a2-m1-cC 80 80 0.7412 0.7875 0.7875 2.23e-36 1pug-a2-m1-cD_1pug-a2-m1-cC
4 1pug-a2-m1-cD 75 74 0.7176 0.8133 0.8243 3.82e-35 1pug-a2-m1-cD_1pug-a2-m1-cC
5 1ybx-a1-m1-cA 87 83 0.3765 0.3678 0.3855 6.23e-11 1ybx-a1-m1-cA_1ybx-a1-m1-cB
6 1ybx-a1-m1-cB 88 83 0.3765 0.3636 0.3855 6.81e-11 1ybx-a1-m1-cA_1ybx-a1-m1-cB
7 5yrx-a1-m2-cA 71 68 0.2706 0.3239 0.3382 3.22e-08 5yrx-a1-m1-cA_5yrx-a1-m2-cA
8 5yrx-a1-m1-cA 71 68 0.2706 0.3239 0.3382 3.22e-08 5yrx-a1-m1-cA_5yrx-a1-m2-cA
9 3f42-a1-m2-cA 87 80 0.3176 0.3103 0.3375 4.98e-04 3f42-a1-m1-cA_3f42-a1-m2-cA, 3f42-a1-m2-cB_3f42-a1-m2-cA
10 3f42-a1-m1-cA 87 80 0.3176 0.3103 0.3375 4.98e-04 3f42-a1-m1-cA_3f42-a1-m2-cA, 3f42-a1-m2-cB_3f42-a1-m1-cA
11 3f42-a1-m2-cB 79 80 0.3176 0.3418 0.3375 0.004 3f42-a1-m2-cB_3f42-a1-m1-cA, 3f42-a1-m2-cB_3f42-a1-m2-cA
12 3vv1-a1-m1-cA 141 51 0.1882 0.1135 0.3137 1.9 3vv1-a1-m1-cB_3vv1-a1-m1-cA
13 3vv1-a1-m1-cB 140 51 0.1882 0.1143 0.3137 2.0 3vv1-a1-m1-cB_3vv1-a1-m1-cA
14 2auc-a1-m1-cC 121 40 0.1412 0.0992 0.3000 5.4 2auc-a1-m1-cA_2auc-a1-m1-cC, 2auc-a1-m1-cB_2auc-a1-m1-cC
15 2auc-a1-m1-cB 107 25 0.1059 0.0841 0.3600 8.4 2auc-a1-m1-cB_2auc-a1-m1-cA, 2auc-a1-m1-cB_2auc-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600