Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
LGGLKQAQQQEKQKQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLEDDKELEDL
IAAAFNDAVRRAEELQKEKASVTAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1j8b-a1-m2-cA 85 85 1.0000 1.0000 1.0000 3.25e-56 1j8b-a1-m1-cA_1j8b-a1-m2-cA
2 1j8b-a1-m1-cA 85 85 1.0000 1.0000 1.0000 3.25e-56 1j8b-a1-m1-cA_1j8b-a1-m2-cA
3 1pug-a2-m1-cC 80 80 0.7412 0.7875 0.7875 2.23e-36 1pug-a2-m1-cD_1pug-a2-m1-cC
4 1pug-a2-m1-cD 75 74 0.7176 0.8133 0.8243 3.82e-35 1pug-a2-m1-cD_1pug-a2-m1-cC
5 1ybx-a1-m1-cA 87 83 0.3765 0.3678 0.3855 6.23e-11 1ybx-a1-m1-cA_1ybx-a1-m1-cB
6 1ybx-a1-m1-cB 88 83 0.3765 0.3636 0.3855 6.81e-11 1ybx-a1-m1-cA_1ybx-a1-m1-cB
7 5yrx-a1-m2-cA 71 68 0.2706 0.3239 0.3382 3.22e-08 5yrx-a1-m1-cA_5yrx-a1-m2-cA
8 5yrx-a1-m1-cA 71 68 0.2706 0.3239 0.3382 3.22e-08 5yrx-a1-m1-cA_5yrx-a1-m2-cA
9 3f42-a1-m2-cA 87 80 0.3176 0.3103 0.3375 4.98e-04 3f42-a1-m1-cA_3f42-a1-m2-cA, 3f42-a1-m2-cB_3f42-a1-m2-cA
10 3f42-a1-m1-cA 87 80 0.3176 0.3103 0.3375 4.98e-04 3f42-a1-m1-cA_3f42-a1-m2-cA, 3f42-a1-m2-cB_3f42-a1-m1-cA
11 3f42-a1-m2-cB 79 80 0.3176 0.3418 0.3375 0.004 3f42-a1-m2-cB_3f42-a1-m1-cA, 3f42-a1-m2-cB_3f42-a1-m2-cA
12 3vv1-a1-m1-cA 141 51 0.1882 0.1135 0.3137 1.9 3vv1-a1-m1-cB_3vv1-a1-m1-cA
13 3vv1-a1-m1-cB 140 51 0.1882 0.1143 0.3137 2.0 3vv1-a1-m1-cB_3vv1-a1-m1-cA
14 2auc-a1-m1-cC 121 40 0.1412 0.0992 0.3000 5.4 2auc-a1-m1-cA_2auc-a1-m1-cC, 2auc-a1-m1-cB_2auc-a1-m1-cC
15 2auc-a1-m1-cB 107 25 0.1059 0.0841 0.3600 8.4 2auc-a1-m1-cB_2auc-a1-m1-cA, 2auc-a1-m1-cB_2auc-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600