Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
LGRLTEETIDIAREVLVEGKSQSDVARERGLSRQRVSSVKSVVSAANEIPREWQRVEVWL
PPNLAEKVRQEADAKADVARKNQLTDAALEHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7bbq-a1-m2-cA 92 92 1.0000 1.0000 1.0000 2.90e-61 7bbq-a1-m1-cA_7bbq-a1-m2-cA
2 7bbq-a1-m1-cA 92 92 1.0000 1.0000 1.0000 2.90e-61 7bbq-a1-m1-cA_7bbq-a1-m2-cA
3 2w7n-a1-m1-cA 94 74 0.3696 0.3617 0.4595 2.20e-08 2w7n-a1-m1-cA_2w7n-a1-m1-cB
4 2w7n-a1-m1-cB 95 74 0.3696 0.3579 0.4595 2.50e-08 2w7n-a1-m1-cA_2w7n-a1-m1-cB
5 5ckt-a2-m1-cC 99 74 0.3696 0.3434 0.4595 2.84e-08 5ckt-a2-m1-cB_5ckt-a2-m1-cC
6 5ckt-a2-m1-cB 99 74 0.3696 0.3434 0.4595 2.84e-08 5ckt-a2-m1-cB_5ckt-a2-m1-cC
7 2n5g-a1-m1-cB 101 74 0.3696 0.3366 0.4595 3.58e-08 2n5g-a1-m1-cA_2n5g-a1-m1-cB
8 2n5g-a1-m1-cA 101 74 0.3696 0.3366 0.4595 3.58e-08 2n5g-a1-m1-cA_2n5g-a1-m1-cB
9 7txz-a1-m1-cA 470 35 0.1522 0.0298 0.4000 0.012 7txz-a1-m1-cA_7txz-a1-m1-cB
10 7txz-a1-m1-cB 471 35 0.1522 0.0297 0.4000 0.012 7txz-a1-m1-cA_7txz-a1-m1-cB
11 7ty0-a1-m1-cD 485 35 0.1522 0.0289 0.4000 0.012 7ty0-a1-m1-cB_7ty0-a1-m1-cD
12 2x9m-a2-m1-cC 417 35 0.1304 0.0288 0.3429 0.076 2x9m-a2-m1-cC_2x9m-a2-m1-cA
13 2x9m-a2-m1-cA 419 35 0.1304 0.0286 0.3429 0.076 2x9m-a2-m1-cC_2x9m-a2-m1-cA
14 6vy4-a1-m1-cA 422 35 0.1304 0.0284 0.3429 0.076 6vy4-a1-m1-cA_6vy4-a1-m1-cB
15 6vy4-a1-m1-cB 426 35 0.1304 0.0282 0.3429 0.076 6vy4-a1-m1-cA_6vy4-a1-m1-cB
16 4eso-a1-m1-cD 239 36 0.1522 0.0586 0.3889 5.9 4eso-a1-m1-cD_4eso-a1-m1-cA
17 3vc7-a4-m2-cA 234 36 0.1522 0.0598 0.3889 6.1 3vc7-a4-m2-cA_3vc7-a4-m2-cB
18 3vc7-a4-m2-cB 235 36 0.1522 0.0596 0.3889 6.5 3vc7-a4-m1-cB_3vc7-a4-m2-cB, 3vc7-a4-m2-cA_3vc7-a4-m2-cB
19 3vc7-a4-m1-cB 235 36 0.1522 0.0596 0.3889 6.5 3vc7-a4-m1-cB_3vc7-a4-m2-cB
20 4eso-a1-m1-cA 247 36 0.1522 0.0567 0.3889 6.7 4eso-a1-m1-cD_4eso-a1-m1-cA
21 5xzo-a1-m1-cB 333 24 0.1196 0.0330 0.4583 6.9 5xzo-a1-m1-cB_5xzo-a1-m1-cA
22 5xzo-a1-m1-cA 335 24 0.1196 0.0328 0.4583 6.9 5xzo-a1-m1-cB_5xzo-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600