Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
LHRIVTEDLQALEKSVSNLEESLTSLSEVVLQNRRGLDLLFLKEGGLCVALKEECSFYVD
HSGAIRDSMSKLRERL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7s94-a2-m1-cE 76 76 1.0000 1.0000 1.0000 3.04e-49 7s94-a2-m1-cE_7s94-a2-m1-cF
2 7s94-a2-m1-cF 83 76 1.0000 0.9157 1.0000 3.13e-49 7s94-a2-m1-cE_7s94-a2-m1-cF
3 4jgs-a2-m1-cB 82 76 0.8026 0.7439 0.8026 1.36e-38 4jgs-a2-m1-cF_4jgs-a2-m1-cB
4 4jgs-a2-m1-cF 80 76 0.8026 0.7625 0.8026 1.55e-38 4jgs-a2-m1-cF_4jgs-a2-m1-cB
5 1mof-a1-m3-cA 53 53 0.5921 0.8491 0.8491 3.95e-27 1mof-a1-m2-cA_1mof-a1-m3-cA
6 1mof-a1-m2-cA 53 53 0.5921 0.8491 0.8491 3.95e-27 1mof-a1-m2-cA_1mof-a1-m3-cA
7 4jf3-a2-m5-cB 92 75 0.4737 0.3913 0.4800 5.53e-23 4jf3-a2-m4-cB_4jf3-a2-m5-cB
8 4jf3-a2-m4-cB 92 75 0.4737 0.3913 0.4800 5.53e-23 4jf3-a2-m4-cB_4jf3-a2-m5-cB
9 5ha6-a1-m4-cA 93 69 0.4079 0.3333 0.4493 5.17e-17 5ha6-a1-m2-cA_5ha6-a1-m4-cA
10 5ha6-a1-m2-cA 93 69 0.4079 0.3333 0.4493 5.17e-17 5ha6-a1-m2-cA_5ha6-a1-m4-cA
11 5ha6-a2-m5-cB 79 69 0.3158 0.3038 0.3478 7.04e-08 5ha6-a2-m3-cB_5ha6-a2-m5-cB
12 5ha6-a2-m3-cB 79 69 0.3158 0.3038 0.3478 7.04e-08 5ha6-a2-m3-cB_5ha6-a2-m5-cB
13 5h9c-a1-m3-cA 78 62 0.2632 0.2564 0.3226 4.48e-04 5h9c-a1-m2-cA_5h9c-a1-m3-cA
14 5h9c-a1-m2-cA 78 62 0.2632 0.2564 0.3226 4.48e-04 5h9c-a1-m2-cA_5h9c-a1-m3-cA
15 3s88-a5-m9-cJ 106 55 0.2105 0.1509 0.2909 0.24 3s88-a5-m5-cJ_3s88-a5-m9-cJ
16 3s88-a5-m5-cJ 106 55 0.2105 0.1509 0.2909 0.24 3s88-a5-m5-cJ_3s88-a5-m9-cJ
17 4g2k-a1-m1-cC 107 45 0.1842 0.1308 0.3111 0.28 4g2k-a1-m1-cC_4g2k-a1-m1-cB
18 4g2k-a1-m1-cB 108 45 0.1842 0.1296 0.3111 0.31 4g2k-a1-m1-cC_4g2k-a1-m1-cB
19 7c11-a1-m1-cD 556 49 0.2105 0.0288 0.3265 4.6 7c11-a1-m1-cC_7c11-a1-m1-cD, 7c11-a1-m1-cD_7c11-a1-m1-cB
20 7c11-a1-m1-cC 556 49 0.2105 0.0288 0.3265 4.6 7c11-a1-m1-cC_7c11-a1-m1-cD
21 7c11-a1-m1-cB 558 49 0.2105 0.0287 0.3265 4.6 7c11-a1-m1-cD_7c11-a1-m1-cB
22 3qm4-a1-m1-cA 465 46 0.2500 0.0409 0.4130 7.0 3qm4-a1-m1-cB_3qm4-a1-m1-cA
23 3qm4-a1-m1-cB 457 46 0.2500 0.0416 0.4130 7.0 3qm4-a1-m1-cB_3qm4-a1-m1-cA
24 2f9q-a2-m2-cD 451 46 0.2500 0.0421 0.4130 7.1 2f9q-a2-m1-cB_2f9q-a2-m2-cD, 2f9q-a2-m2-cD_2f9q-a2-m2-cA
25 2f9q-a2-m1-cB 451 46 0.2500 0.0421 0.4130 7.1 2f9q-a2-m1-cB_2f9q-a2-m2-cD
26 2f9q-a1-m1-cD 451 46 0.2500 0.0421 0.4130 7.1 2f9q-a1-m1-cB_2f9q-a1-m1-cD, 2f9q-a1-m1-cD_2f9q-a1-m1-cC
27 2f9q-a1-m1-cB 451 46 0.2500 0.0421 0.4130 7.1 2f9q-a1-m1-cB_2f9q-a1-m1-cD
28 2f9q-a2-m2-cA 454 46 0.2500 0.0419 0.4130 7.1 2f9q-a2-m2-cD_2f9q-a2-m2-cA
29 2f9q-a1-m1-cC 454 46 0.2500 0.0419 0.4130 7.1 2f9q-a1-m1-cD_2f9q-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600