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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
LIPKLPFSRLVREFIVKYSDDEPLRVTEGALLAMQESCEMYLTQRLADSYMLTKHRNRVT
LEVRDMALMAYICD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6xwt-a1-m1-cC 74 74 1.0000 1.0000 1.0000 1.67e-50 6xwt-a1-m1-cA_6xwt-a1-m1-cC
2 6xwt-a1-m1-cA 74 74 1.0000 1.0000 1.0000 1.67e-50 6xwt-a1-m1-cA_6xwt-a1-m1-cC
3 5zbx-a1-m1-cE 101 72 0.4054 0.2970 0.4167 3.85e-11 5zbx-a1-m1-cA_5zbx-a1-m1-cE
4 5zbx-a1-m1-cA 95 68 0.4054 0.3158 0.4412 4.23e-11 5zbx-a1-m1-cA_5zbx-a1-m1-cE
5 7z0o-a1-m1-cA 94 68 0.3919 0.3085 0.4265 1.73e-10 7z0o-a1-m1-cA_7z0o-a1-m1-cC
6 7z0o-a1-m1-cC 97 68 0.3919 0.2990 0.4265 2.02e-10 7z0o-a1-m1-cA_7z0o-a1-m1-cC
7 4jjn-a1-m1-cE 96 68 0.3919 0.3021 0.4265 2.09e-10 4jjn-a1-m1-cE_4jjn-a1-m1-cA
8 4jjn-a1-m1-cA 98 68 0.3919 0.2959 0.4265 2.30e-10 4jjn-a1-m1-cE_4jjn-a1-m1-cA
9 5ay8-a1-m1-cA 97 68 0.4189 0.3196 0.4559 2.40e-10 5ay8-a1-m1-cE_5ay8-a1-m1-cA
10 5ay8-a1-m1-cE 96 68 0.4189 0.3229 0.4559 2.43e-10 5ay8-a1-m1-cE_5ay8-a1-m1-cA
11 6uph-a1-m1-cA 93 69 0.3649 0.2903 0.3913 3.83e-10 6uph-a1-m1-cA_6uph-a1-m1-cE
12 6uph-a1-m1-cE 97 69 0.3649 0.2784 0.3913 4.46e-10 6uph-a1-m1-cA_6uph-a1-m1-cE
13 6kxv-a1-m1-cA 94 68 0.3649 0.2872 0.3971 7.43e-10 6kxv-a1-m1-cA_6kxv-a1-m1-cE
14 6kxv-a1-m1-cE 95 68 0.3649 0.2842 0.3971 9.53e-10 6kxv-a1-m1-cA_6kxv-a1-m1-cE
15 7d69-a1-m1-cA 90 72 0.3649 0.3000 0.3750 1.28e-09 7d69-a1-m1-cA_7d69-a1-m1-cE
16 7y7i-a1-m1-cE 97 68 0.3649 0.2784 0.3971 1.39e-09 7y7i-a1-m1-cE_7y7i-a1-m1-cA
17 2yfw-a2-m1-cE 88 68 0.3514 0.2955 0.3824 1.45e-09 2yfw-a2-m1-cC_2yfw-a2-m1-cE
18 7y7i-a1-m1-cA 102 68 0.3649 0.2647 0.3971 1.48e-09 7y7i-a1-m1-cE_7y7i-a1-m1-cA
19 7d69-a1-m1-cE 99 72 0.3649 0.2727 0.3750 1.50e-09 7d69-a1-m1-cA_7d69-a1-m1-cE
20 8f86-a1-m1-cE 95 72 0.3919 0.3053 0.4028 1.91e-09 8f86-a1-m1-cE_8f86-a1-m1-cA
21 8f86-a1-m1-cA 107 72 0.3919 0.2710 0.4028 2.45e-09 8f86-a1-m1-cE_8f86-a1-m1-cA
22 2yfw-a2-m1-cC 71 68 0.3378 0.3521 0.3676 8.42e-08 2yfw-a2-m1-cC_2yfw-a2-m1-cE
23 4h08-a1-m2-cA 199 69 0.2703 0.1005 0.2899 1.1 4h08-a1-m1-cA_4h08-a1-m2-cA
24 4h08-a1-m1-cA 199 69 0.2703 0.1005 0.2899 1.1 4h08-a1-m1-cA_4h08-a1-m2-cA
25 4bzi-a1-m1-cL 735 40 0.1622 0.0163 0.3000 2.3 4bzi-a1-m1-cE_4bzi-a1-m1-cL
26 4bzi-a1-m1-cE 735 40 0.1622 0.0163 0.3000 2.3 4bzi-a1-m1-cE_4bzi-a1-m1-cL
27 1mkt-a1-m2-cA 123 39 0.1216 0.0732 0.2308 4.9 1mkt-a1-m1-cA_1mkt-a1-m2-cA
28 1mkt-a1-m1-cA 123 39 0.1216 0.0732 0.2308 4.9 1mkt-a1-m1-cA_1mkt-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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