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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
LKAVRLIKFLYQSNPPPNPEGTRQARRNRRRRWRARQRQIHSISERIRSTYL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4pmi-a2-m6-cC 52 52 1.0000 1.0000 1.0000 1.33e-31 4pmi-a2-m6-cC_4pmi-a2-m6-cB
2 3lph-a2-m1-cD 57 52 0.9808 0.8947 0.9808 4.18e-31 3lph-a2-m1-cD_3lph-a2-m1-cC
3 3lph-a2-m1-cC 58 52 0.9808 0.8793 0.9808 4.39e-31 3lph-a2-m1-cD_3lph-a2-m1-cC
4 4pmi-a2-m6-cB 53 51 0.9808 0.9623 1.0000 5.51e-31 4pmi-a2-m6-cC_4pmi-a2-m6-cB
5 6bsy-a1-m1-cA 58 52 0.9615 0.8621 0.9615 3.74e-30 6bsy-a1-m1-cB_6bsy-a1-m1-cA
6 6bsy-a1-m1-cB 55 52 0.9615 0.9091 0.9615 5.75e-30 6bsy-a1-m1-cB_6bsy-a1-m1-cA
7 5jxl-a1-m9-cA 851 37 0.2692 0.0165 0.3784 9.1 5jxl-a1-m3-cA_5jxl-a1-m9-cA, 5jxl-a1-m4-cA_5jxl-a1-m9-cA
8 5jxl-a1-m4-cA 851 37 0.2692 0.0165 0.3784 9.1 5jxl-a1-m4-cA_5jxl-a1-m9-cA
9 5jxl-a1-m3-cA 851 37 0.2692 0.0165 0.3784 9.1 5jxl-a1-m3-cA_5jxl-a1-m9-cA
10 5jxl-a1-m11-cA 851 37 0.2692 0.0165 0.3784 9.1 5jxl-a1-m1-cA_5jxl-a1-m11-cA
11 5jxl-a1-m1-cA 851 37 0.2692 0.0165 0.3784 9.1 5jxl-a1-m1-cA_5jxl-a1-m11-cA

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Reference:
Jacob Schwartz et al.

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