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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
LKCHNKLVPFLSKTCPEGKNLCYKMTLMKMPKIPIKRGCTDACPKSSLLVKVVCCNKDKC
N

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vts-a1-m1-cB 61 61 1.0000 1.0000 1.0000 3.13e-38 3vts-a1-m1-cA_3vts-a1-m1-cB
2 3vts-a1-m1-cA 61 61 1.0000 1.0000 1.0000 3.13e-38 3vts-a1-m1-cA_3vts-a1-m1-cB
3 1xt3-a1-m2-cB 60 61 0.7213 0.7333 0.7213 1.42e-25 1xt3-a1-m1-cA_1xt3-a1-m2-cB
4 1xt3-a1-m1-cA 60 61 0.7213 0.7333 0.7213 1.42e-25 1xt3-a1-m1-cA_1xt3-a1-m2-cB
5 1kxi-a1-m1-cB 62 62 0.6885 0.6774 0.6774 1.59e-24 1kxi-a1-m1-cA_1kxi-a1-m1-cB
6 1kxi-a1-m1-cA 62 62 0.6885 0.6774 0.6774 1.59e-24 1kxi-a1-m1-cA_1kxi-a1-m1-cB
7 1tgx-a4-m15-cC 60 61 0.6721 0.6833 0.6721 8.65e-24 1tgx-a4-m14-cB_1tgx-a4-m15-cC
8 1tgx-a4-m14-cB 60 61 0.6721 0.6833 0.6721 8.65e-24 1tgx-a4-m14-cB_1tgx-a4-m15-cC
9 1tgx-a3-m9-cA 60 61 0.6721 0.6833 0.6721 8.65e-24 1tgx-a3-m10-cB_1tgx-a3-m9-cA
10 1tgx-a3-m10-cB 60 61 0.6721 0.6833 0.6721 8.65e-24 1tgx-a3-m10-cB_1tgx-a3-m9-cA
11 1tgx-a1-m4-cC 60 61 0.6721 0.6833 0.6721 8.65e-24 1tgx-a1-m4-cA_1tgx-a1-m4-cC
12 1tgx-a1-m4-cA 60 61 0.6721 0.6833 0.6721 8.65e-24 1tgx-a1-m4-cA_1tgx-a1-m4-cC
13 4om4-a1-m1-cE 60 61 0.6557 0.6667 0.6557 3.39e-22 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
14 4om4-a1-m1-cD 60 61 0.6557 0.6667 0.6557 3.39e-22 4om4-a1-m1-cD_4om4-a1-m1-cE
15 4om4-a1-m1-cC 60 61 0.6557 0.6667 0.6557 3.39e-22 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
16 4om4-a1-m1-cB 60 61 0.6557 0.6667 0.6557 3.39e-22 4om4-a1-m1-cA_4om4-a1-m1-cB
17 4om4-a1-m1-cA 60 61 0.6557 0.6667 0.6557 3.39e-22 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
18 4om5-a1-m1-cC 60 57 0.6066 0.6167 0.6491 5.93e-22 4om5-a1-m1-cA_4om5-a1-m1-cC
19 4om5-a1-m1-cB 60 57 0.6066 0.6167 0.6491 5.93e-22 4om5-a1-m1-cA_4om5-a1-m1-cB
20 4om5-a1-m1-cA 60 57 0.6066 0.6167 0.6491 5.93e-22 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
21 1cdt-a1-m1-cB 60 61 0.6393 0.6500 0.6393 3.01e-21 1cdt-a1-m1-cA_1cdt-a1-m1-cB
22 1cdt-a1-m1-cA 60 61 0.6393 0.6500 0.6393 3.01e-21 1cdt-a1-m1-cA_1cdt-a1-m1-cB
23 4zqy-a2-m1-cC 65 50 0.3607 0.3385 0.4400 2.91e-08 4zqy-a2-m1-cB_4zqy-a2-m1-cC
24 4zqy-a2-m1-cB 65 50 0.3607 0.3385 0.4400 2.91e-08 4zqy-a2-m1-cB_4zqy-a2-m1-cC
25 3hh7-a1-m1-cB 65 59 0.3607 0.3385 0.3729 3.91e-08 3hh7-a1-m1-cA_3hh7-a1-m1-cB
26 3hh7-a1-m1-cA 65 59 0.3607 0.3385 0.3729 3.91e-08 3hh7-a1-m1-cA_3hh7-a1-m1-cB
27 3neq-a3-m2-cA 66 52 0.3443 0.3182 0.4038 4.83e-07 3neq-a3-m1-cB_3neq-a3-m2-cA
28 3neq-a3-m1-cB 66 52 0.3443 0.3182 0.4038 4.83e-07 3neq-a3-m1-cB_3neq-a3-m2-cA
29 7c28-a1-m1-cB 59 55 0.3770 0.3898 0.4182 5.45e-07 7c28-a1-m1-cB_7c28-a1-m1-cA
30 7c28-a1-m1-cA 65 52 0.3607 0.3385 0.4231 9.29e-07 7c28-a1-m1-cB_7c28-a1-m1-cA
31 4do8-a3-m2-cB 66 58 0.3279 0.3030 0.3448 1.41e-06 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
32 4do8-a3-m2-cA 66 58 0.3279 0.3030 0.3448 1.41e-06 4do8-a3-m2-cA_4do8-a3-m2-cB
33 4do8-a3-m1-cB 66 58 0.3279 0.3030 0.3448 1.41e-06 4do8-a3-m1-cB_4do8-a3-m2-cB
34 4do8-a3-m1-cA 66 58 0.3279 0.3030 0.3448 1.41e-06 4do8-a3-m1-cA_4do8-a3-m2-cB
35 4lft-a1-m1-cA 64 61 0.3607 0.3438 0.3607 6.63e-06 4lft-a1-m1-cA_4lft-a1-m1-cB
36 4lft-a1-m1-cB 72 61 0.3607 0.3056 0.3607 8.35e-06 4lft-a1-m1-cA_4lft-a1-m1-cB
37 2abx-a1-m1-cB 74 67 0.3770 0.3108 0.3433 1.40e-05 2abx-a1-m1-cA_2abx-a1-m1-cB
38 2abx-a1-m1-cA 74 67 0.3770 0.3108 0.3433 1.40e-05 2abx-a1-m1-cA_2abx-a1-m1-cB
39 1ff4-a2-m3-cA 65 51 0.3279 0.3077 0.3922 1.58e-05 1ff4-a2-m1-cA_1ff4-a2-m3-cA
40 1ff4-a2-m1-cA 65 51 0.3279 0.3077 0.3922 1.58e-05 1ff4-a2-m1-cA_1ff4-a2-m3-cA
41 1ff4-a1-m2-cA 65 51 0.3279 0.3077 0.3922 1.58e-05 1ff4-a1-m1-cA_1ff4-a1-m2-cA
42 1ff4-a1-m1-cA 65 51 0.3279 0.3077 0.3922 1.58e-05 1ff4-a1-m1-cA_1ff4-a1-m2-cA
43 1v6p-a1-m1-cB 62 63 0.3279 0.3226 0.3175 9.81e-05 1v6p-a1-m1-cA_1v6p-a1-m1-cB
44 1v6p-a1-m1-cA 62 63 0.3279 0.3226 0.3175 9.81e-05 1v6p-a1-m1-cA_1v6p-a1-m1-cB
45 1qkd-a1-m1-cB 62 58 0.3115 0.3065 0.3276 1.14e-04 1qkd-a1-m1-cA_1qkd-a1-m1-cB
46 1qkd-a1-m1-cA 62 58 0.3115 0.3065 0.3276 1.14e-04 1qkd-a1-m1-cA_1qkd-a1-m1-cB
47 5xwe-a1-m1-cA 51 50 0.2951 0.3529 0.3600 0.002 5xwe-a1-m1-cB_5xwe-a1-m1-cA
48 5xwe-a1-m1-cB 50 50 0.2951 0.3600 0.3600 0.002 5xwe-a1-m1-cB_5xwe-a1-m1-cA
49 6zfm-a1-m1-cE 65 59 0.3607 0.3385 0.3729 0.005 6zfm-a1-m1-cE_6zfm-a1-m1-cA
50 4bdt-a2-m6-cB 61 45 0.2951 0.2951 0.4000 0.006 4bdt-a2-m4-cB_4bdt-a2-m6-cB
51 4bdt-a2-m4-cB 61 45 0.2951 0.2951 0.4000 0.006 4bdt-a2-m4-cB_4bdt-a2-m6-cB
52 1fsc-a1-m2-cA 61 45 0.2951 0.2951 0.4000 0.006 1fsc-a1-m1-cA_1fsc-a1-m2-cA
53 1fsc-a1-m1-cA 61 45 0.2951 0.2951 0.4000 0.006 1fsc-a1-m1-cA_1fsc-a1-m2-cA
54 4aea-a2-m2-cB 67 54 0.3443 0.3134 0.3889 0.091 4aea-a2-m1-cB_4aea-a2-m2-cB
55 4aea-a2-m1-cB 67 54 0.3443 0.3134 0.3889 0.091 4aea-a2-m1-cB_4aea-a2-m2-cB
56 6zfm-a1-m1-cD 71 54 0.3443 0.2958 0.3889 0.12 6zfm-a1-m1-cA_6zfm-a1-m1-cD
57 6zfm-a1-m1-cA 71 54 0.3443 0.2958 0.3889 0.12 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
58 2ctx-a1-m2-cA 71 54 0.3443 0.2958 0.3889 0.12 2ctx-a1-m1-cA_2ctx-a1-m2-cA
59 2ctx-a1-m1-cA 71 54 0.3443 0.2958 0.3889 0.12 2ctx-a1-m1-cA_2ctx-a1-m2-cA
60 4rud-a1-m1-cB 58 63 0.3607 0.3793 0.3492 0.14 4rud-a1-m1-cA_4rud-a1-m1-cB
61 4rud-a1-m1-cA 58 63 0.3607 0.3793 0.3492 0.14 4rud-a1-m1-cA_4rud-a1-m1-cB
62 2w1v-a1-m1-cB 274 30 0.1639 0.0365 0.3333 1.1 2w1v-a1-m1-cA_2w1v-a1-m1-cB
63 2w1v-a1-m1-cA 274 30 0.1639 0.0365 0.3333 1.1 2w1v-a1-m1-cA_2w1v-a1-m1-cB
64 4pch-a1-m1-cC 265 28 0.1639 0.0377 0.3571 1.7 4pch-a1-m1-cC_4pch-a1-m1-cB
65 4pch-a1-m1-cB 266 28 0.1639 0.0376 0.3571 1.7 4pch-a1-m1-cC_4pch-a1-m1-cB
66 4pcg-a1-m1-cD 263 24 0.1311 0.0304 0.3333 1.8 4pcg-a1-m1-cD_4pcg-a1-m1-cE
67 4pcg-a1-m1-cE 264 24 0.1311 0.0303 0.3333 1.8 4pcg-a1-m1-cD_4pcg-a1-m1-cE

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Reference:
Jacob Schwartz et al.

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