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HomodimerDB
>protein (length=62)
LKCHNTQLPFIYKTCPEGKNLCFKATLKKFPLKFPVKRGCADNCPKNSALLKYVCCSTDK
CN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1kxi-a1-m1-cB 62 62 1.0000 1.0000 1.0000 8.44e-40 1kxi-a1-m1-cA_1kxi-a1-m1-cB
2 1kxi-a1-m1-cA 62 62 1.0000 1.0000 1.0000 8.44e-40 1kxi-a1-m1-cA_1kxi-a1-m1-cB
3 3vts-a1-m1-cB 61 62 0.6774 0.6885 0.6774 1.61e-24 3vts-a1-m1-cA_3vts-a1-m1-cB
4 3vts-a1-m1-cA 61 62 0.6774 0.6885 0.6774 1.61e-24 3vts-a1-m1-cA_3vts-a1-m1-cB
5 1cdt-a1-m1-cB 60 62 0.6613 0.6833 0.6613 2.44e-21 1cdt-a1-m1-cA_1cdt-a1-m1-cB
6 1cdt-a1-m1-cA 60 62 0.6613 0.6833 0.6613 2.44e-21 1cdt-a1-m1-cA_1cdt-a1-m1-cB
7 1tgx-a4-m15-cC 60 62 0.6129 0.6333 0.6129 2.94e-20 1tgx-a4-m14-cB_1tgx-a4-m15-cC
8 1tgx-a4-m14-cB 60 62 0.6129 0.6333 0.6129 2.94e-20 1tgx-a4-m14-cB_1tgx-a4-m15-cC
9 1tgx-a3-m9-cA 60 62 0.6129 0.6333 0.6129 2.94e-20 1tgx-a3-m10-cB_1tgx-a3-m9-cA
10 1tgx-a3-m10-cB 60 62 0.6129 0.6333 0.6129 2.94e-20 1tgx-a3-m10-cB_1tgx-a3-m9-cA
11 1tgx-a1-m4-cC 60 62 0.6129 0.6333 0.6129 2.94e-20 1tgx-a1-m4-cA_1tgx-a1-m4-cC
12 1tgx-a1-m4-cA 60 62 0.6129 0.6333 0.6129 2.94e-20 1tgx-a1-m4-cA_1tgx-a1-m4-cC
13 4om4-a1-m1-cE 60 62 0.6452 0.6667 0.6452 4.32e-20 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
14 4om4-a1-m1-cD 60 62 0.6452 0.6667 0.6452 4.32e-20 4om4-a1-m1-cD_4om4-a1-m1-cE
15 4om4-a1-m1-cC 60 62 0.6452 0.6667 0.6452 4.32e-20 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
16 4om4-a1-m1-cB 60 62 0.6452 0.6667 0.6452 4.32e-20 4om4-a1-m1-cA_4om4-a1-m1-cB
17 4om4-a1-m1-cA 60 62 0.6452 0.6667 0.6452 4.32e-20 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
18 4om5-a1-m1-cC 60 58 0.5968 0.6167 0.6379 7.99e-20 4om5-a1-m1-cA_4om5-a1-m1-cC
19 4om5-a1-m1-cB 60 58 0.5968 0.6167 0.6379 7.99e-20 4om5-a1-m1-cA_4om5-a1-m1-cB
20 4om5-a1-m1-cA 60 58 0.5968 0.6167 0.6379 7.99e-20 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
21 1xt3-a1-m2-cB 60 62 0.6290 0.6500 0.6290 1.46e-19 1xt3-a1-m1-cA_1xt3-a1-m2-cB
22 1xt3-a1-m1-cA 60 62 0.6290 0.6500 0.6290 1.46e-19 1xt3-a1-m1-cA_1xt3-a1-m2-cB
23 3neq-a3-m2-cA 66 51 0.3710 0.3485 0.4510 1.38e-08 3neq-a3-m1-cB_3neq-a3-m2-cA
24 3neq-a3-m1-cB 66 51 0.3710 0.3485 0.4510 1.38e-08 3neq-a3-m1-cB_3neq-a3-m2-cA
25 4do8-a3-m2-cB 66 51 0.3548 0.3333 0.4314 7.03e-08 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
26 4do8-a3-m2-cA 66 51 0.3548 0.3333 0.4314 7.03e-08 4do8-a3-m2-cA_4do8-a3-m2-cB
27 4do8-a3-m1-cB 66 51 0.3548 0.3333 0.4314 7.03e-08 4do8-a3-m1-cB_4do8-a3-m2-cB
28 4do8-a3-m1-cA 66 51 0.3548 0.3333 0.4314 7.03e-08 4do8-a3-m1-cA_4do8-a3-m2-cB
29 4zqy-a2-m1-cC 65 50 0.3871 0.3692 0.4800 7.58e-08 4zqy-a2-m1-cB_4zqy-a2-m1-cC
30 4zqy-a2-m1-cB 65 50 0.3871 0.3692 0.4800 7.58e-08 4zqy-a2-m1-cB_4zqy-a2-m1-cC
31 7c28-a1-m1-cB 59 57 0.3871 0.4068 0.4211 3.28e-07 7c28-a1-m1-cB_7c28-a1-m1-cA
32 1ff4-a2-m3-cA 65 50 0.3387 0.3231 0.4200 3.46e-07 1ff4-a2-m1-cA_1ff4-a2-m3-cA
33 1ff4-a2-m1-cA 65 50 0.3387 0.3231 0.4200 3.46e-07 1ff4-a2-m1-cA_1ff4-a2-m3-cA
34 1ff4-a1-m2-cA 65 50 0.3387 0.3231 0.4200 3.46e-07 1ff4-a1-m1-cA_1ff4-a1-m2-cA
35 1ff4-a1-m1-cA 65 50 0.3387 0.3231 0.4200 3.46e-07 1ff4-a1-m1-cA_1ff4-a1-m2-cA
36 7c28-a1-m1-cA 65 53 0.3710 0.3538 0.4340 3.69e-07 7c28-a1-m1-cB_7c28-a1-m1-cA
37 2abx-a1-m1-cB 74 69 0.4355 0.3649 0.3913 1.60e-06 2abx-a1-m1-cA_2abx-a1-m1-cB
38 2abx-a1-m1-cA 74 69 0.4355 0.3649 0.3913 1.60e-06 2abx-a1-m1-cA_2abx-a1-m1-cB
39 4lft-a1-m1-cA 64 53 0.3710 0.3594 0.4340 2.93e-05 4lft-a1-m1-cA_4lft-a1-m1-cB
40 4lft-a1-m1-cB 72 53 0.3710 0.3194 0.4340 4.77e-05 4lft-a1-m1-cA_4lft-a1-m1-cB
41 3hh7-a1-m1-cB 65 60 0.3226 0.3077 0.3333 2.03e-04 3hh7-a1-m1-cA_3hh7-a1-m1-cB
42 3hh7-a1-m1-cA 65 60 0.3226 0.3077 0.3333 2.03e-04 3hh7-a1-m1-cA_3hh7-a1-m1-cB
43 1v6p-a1-m1-cB 62 64 0.3387 0.3387 0.3281 4.33e-04 1v6p-a1-m1-cA_1v6p-a1-m1-cB
44 1v6p-a1-m1-cA 62 64 0.3387 0.3387 0.3281 4.33e-04 1v6p-a1-m1-cA_1v6p-a1-m1-cB
45 1qkd-a1-m1-cB 62 59 0.2903 0.2903 0.3051 0.002 1qkd-a1-m1-cA_1qkd-a1-m1-cB
46 1qkd-a1-m1-cA 62 59 0.2903 0.2903 0.3051 0.002 1qkd-a1-m1-cA_1qkd-a1-m1-cB
47 6zfm-a1-m1-cE 65 57 0.3548 0.3385 0.3860 0.007 6zfm-a1-m1-cE_6zfm-a1-m1-cA
48 4rud-a1-m1-cB 58 62 0.3387 0.3621 0.3387 0.008 4rud-a1-m1-cA_4rud-a1-m1-cB
49 4rud-a1-m1-cA 58 62 0.3387 0.3621 0.3387 0.008 4rud-a1-m1-cA_4rud-a1-m1-cB
50 5xwe-a1-m1-cA 51 49 0.2742 0.3333 0.3469 0.015 5xwe-a1-m1-cB_5xwe-a1-m1-cA
51 5xwe-a1-m1-cB 50 49 0.2742 0.3400 0.3469 0.015 5xwe-a1-m1-cB_5xwe-a1-m1-cA
52 4aea-a2-m2-cB 67 53 0.3226 0.2985 0.3774 0.10 4aea-a2-m1-cB_4aea-a2-m2-cB
53 4aea-a2-m1-cB 67 53 0.3226 0.2985 0.3774 0.10 4aea-a2-m1-cB_4aea-a2-m2-cB
54 6zfm-a1-m1-cD 71 53 0.3226 0.2817 0.3774 0.13 6zfm-a1-m1-cA_6zfm-a1-m1-cD
55 6zfm-a1-m1-cA 71 53 0.3226 0.2817 0.3774 0.13 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
56 2ctx-a1-m2-cA 71 53 0.3226 0.2817 0.3774 0.13 2ctx-a1-m1-cA_2ctx-a1-m2-cA
57 2ctx-a1-m1-cA 71 53 0.3226 0.2817 0.3774 0.13 2ctx-a1-m1-cA_2ctx-a1-m2-cA
58 3tyw-a6-m1-cB 397 22 0.1452 0.0227 0.4091 5.3 3tyw-a6-m1-cB_3tyw-a6-m3-cC
59 3tyw-a6-m3-cC 398 22 0.1452 0.0226 0.4091 5.3 3tyw-a6-m1-cB_3tyw-a6-m3-cC
60 1noz-a2-m2-cB 346 35 0.1935 0.0347 0.3429 6.5 1noz-a2-m1-cA_1noz-a2-m2-cB, 1noz-a2-m2-cA_1noz-a2-m2-cB
61 1noz-a2-m2-cA 346 35 0.1935 0.0347 0.3429 6.5 1noz-a2-m1-cA_1noz-a2-m2-cA, 1noz-a2-m2-cA_1noz-a2-m2-cB
62 1noz-a2-m1-cA 346 35 0.1935 0.0347 0.3429 6.5 1noz-a2-m1-cA_1noz-a2-m2-cA, 1noz-a2-m1-cA_1noz-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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