Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=60)
LKCNKLIPIAYKTCPEGKNLCYKMMLASKKMVPVKRGCINVCPKNSALVKYVCCSTDRCN

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 1cdt-a1-m1-cB 60 60 1.0000 1.0000 1.0000 1.30e-37 1cdt-a1-m1-cA_1cdt-a1-m1-cB
2 1cdt-a1-m1-cA 60 60 1.0000 1.0000 1.0000 1.30e-37 1cdt-a1-m1-cA_1cdt-a1-m1-cB
3 4om4-a1-m1-cE 60 60 0.8000 0.8000 0.8000 3.34e-30 4om4-a1-m1-cA_4om4-a1-m1-cE, 4om4-a1-m1-cC_4om4-a1-m1-cE, 4om4-a1-m1-cD_4om4-a1-m1-cE
4 4om4-a1-m1-cD 60 60 0.8000 0.8000 0.8000 3.34e-30 4om4-a1-m1-cD_4om4-a1-m1-cE
5 4om4-a1-m1-cC 60 60 0.8000 0.8000 0.8000 3.34e-30 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cC_4om4-a1-m1-cE
6 4om4-a1-m1-cB 60 60 0.8000 0.8000 0.8000 3.34e-30 4om4-a1-m1-cA_4om4-a1-m1-cB
7 4om4-a1-m1-cA 60 60 0.8000 0.8000 0.8000 3.34e-30 4om4-a1-m1-cA_4om4-a1-m1-cB, 4om4-a1-m1-cA_4om4-a1-m1-cC, 4om4-a1-m1-cA_4om4-a1-m1-cE
8 4om5-a1-m1-cC 60 59 0.7833 0.7833 0.7966 1.57e-29 4om5-a1-m1-cA_4om5-a1-m1-cC
9 4om5-a1-m1-cB 60 59 0.7833 0.7833 0.7966 1.57e-29 4om5-a1-m1-cA_4om5-a1-m1-cB
10 4om5-a1-m1-cA 60 59 0.7833 0.7833 0.7966 1.57e-29 4om5-a1-m1-cA_4om5-a1-m1-cB, 4om5-a1-m1-cA_4om5-a1-m1-cC
11 1xt3-a1-m2-cB 60 60 0.7500 0.7500 0.7500 3.55e-28 1xt3-a1-m1-cA_1xt3-a1-m2-cB
12 1xt3-a1-m1-cA 60 60 0.7500 0.7500 0.7500 3.55e-28 1xt3-a1-m1-cA_1xt3-a1-m2-cB
13 1tgx-a4-m15-cC 60 60 0.7000 0.7000 0.7000 1.55e-26 1tgx-a4-m14-cB_1tgx-a4-m15-cC
14 1tgx-a4-m14-cB 60 60 0.7000 0.7000 0.7000 1.55e-26 1tgx-a4-m14-cB_1tgx-a4-m15-cC
15 1tgx-a3-m9-cA 60 60 0.7000 0.7000 0.7000 1.55e-26 1tgx-a3-m10-cB_1tgx-a3-m9-cA
16 1tgx-a3-m10-cB 60 60 0.7000 0.7000 0.7000 1.55e-26 1tgx-a3-m10-cB_1tgx-a3-m9-cA
17 1tgx-a1-m4-cC 60 60 0.7000 0.7000 0.7000 1.55e-26 1tgx-a1-m4-cA_1tgx-a1-m4-cC
18 1tgx-a1-m4-cA 60 60 0.7000 0.7000 0.7000 1.55e-26 1tgx-a1-m4-cA_1tgx-a1-m4-cC
19 1kxi-a1-m1-cB 62 62 0.6833 0.6613 0.6613 2.36e-21 1kxi-a1-m1-cA_1kxi-a1-m1-cB
20 1kxi-a1-m1-cA 62 62 0.6833 0.6613 0.6613 2.36e-21 1kxi-a1-m1-cA_1kxi-a1-m1-cB
21 3vts-a1-m1-cB 61 61 0.6500 0.6393 0.6393 2.96e-21 3vts-a1-m1-cA_3vts-a1-m1-cB
22 3vts-a1-m1-cA 61 61 0.6500 0.6393 0.6393 2.96e-21 3vts-a1-m1-cA_3vts-a1-m1-cB
23 4lft-a1-m1-cA 64 62 0.4333 0.4062 0.4194 1.75e-08 4lft-a1-m1-cA_4lft-a1-m1-cB
24 4lft-a1-m1-cB 72 62 0.4333 0.3611 0.4194 2.00e-08 4lft-a1-m1-cA_4lft-a1-m1-cB
25 2abx-a1-m1-cB 74 58 0.4000 0.3243 0.4138 3.00e-08 2abx-a1-m1-cA_2abx-a1-m1-cB
26 2abx-a1-m1-cA 74 58 0.4000 0.3243 0.4138 3.00e-08 2abx-a1-m1-cA_2abx-a1-m1-cB
27 3neq-a3-m2-cA 66 62 0.3833 0.3485 0.3710 4.54e-08 3neq-a3-m1-cB_3neq-a3-m2-cA
28 3neq-a3-m1-cB 66 62 0.3833 0.3485 0.3710 4.54e-08 3neq-a3-m1-cB_3neq-a3-m2-cA
29 4zqy-a2-m1-cC 65 50 0.3667 0.3385 0.4400 3.04e-07 4zqy-a2-m1-cB_4zqy-a2-m1-cC
30 4zqy-a2-m1-cB 65 50 0.3667 0.3385 0.4400 3.04e-07 4zqy-a2-m1-cB_4zqy-a2-m1-cC
31 3hh7-a1-m1-cB 65 58 0.3167 0.2923 0.3276 1.15e-05 3hh7-a1-m1-cA_3hh7-a1-m1-cB
32 3hh7-a1-m1-cA 65 58 0.3167 0.2923 0.3276 1.15e-05 3hh7-a1-m1-cA_3hh7-a1-m1-cB
33 4do8-a3-m2-cB 66 57 0.3167 0.2879 0.3333 1.24e-05 4do8-a3-m1-cA_4do8-a3-m2-cB, 4do8-a3-m1-cB_4do8-a3-m2-cB, 4do8-a3-m2-cA_4do8-a3-m2-cB
34 4do8-a3-m2-cA 66 57 0.3167 0.2879 0.3333 1.24e-05 4do8-a3-m2-cA_4do8-a3-m2-cB
35 4do8-a3-m1-cB 66 57 0.3167 0.2879 0.3333 1.24e-05 4do8-a3-m1-cB_4do8-a3-m2-cB
36 4do8-a3-m1-cA 66 57 0.3167 0.2879 0.3333 1.24e-05 4do8-a3-m1-cA_4do8-a3-m2-cB
37 1ff4-a2-m3-cA 65 53 0.3000 0.2769 0.3396 6.86e-05 1ff4-a2-m1-cA_1ff4-a2-m3-cA
38 1ff4-a2-m1-cA 65 53 0.3000 0.2769 0.3396 6.86e-05 1ff4-a2-m1-cA_1ff4-a2-m3-cA
39 1ff4-a1-m2-cA 65 53 0.3000 0.2769 0.3396 6.86e-05 1ff4-a1-m1-cA_1ff4-a1-m2-cA
40 1ff4-a1-m1-cA 65 53 0.3000 0.2769 0.3396 6.86e-05 1ff4-a1-m1-cA_1ff4-a1-m2-cA
41 7c28-a1-m1-cA 65 56 0.3667 0.3385 0.3929 2.06e-04 7c28-a1-m1-cB_7c28-a1-m1-cA
42 7c28-a1-m1-cB 59 53 0.3667 0.3729 0.4151 2.73e-04 7c28-a1-m1-cB_7c28-a1-m1-cA
43 1v6p-a1-m1-cB 62 47 0.2833 0.2742 0.3617 0.001 1v6p-a1-m1-cA_1v6p-a1-m1-cB
44 1v6p-a1-m1-cA 62 47 0.2833 0.2742 0.3617 0.001 1v6p-a1-m1-cA_1v6p-a1-m1-cB
45 1qkd-a1-m1-cB 62 53 0.2833 0.2742 0.3208 0.002 1qkd-a1-m1-cA_1qkd-a1-m1-cB
46 1qkd-a1-m1-cA 62 53 0.2833 0.2742 0.3208 0.002 1qkd-a1-m1-cA_1qkd-a1-m1-cB
47 5xwe-a1-m1-cA 51 48 0.2833 0.3333 0.3542 0.004 5xwe-a1-m1-cB_5xwe-a1-m1-cA
48 5xwe-a1-m1-cB 50 48 0.2833 0.3400 0.3542 0.004 5xwe-a1-m1-cB_5xwe-a1-m1-cA
49 4aea-a2-m2-cB 67 64 0.3667 0.3284 0.3438 0.013 4aea-a2-m1-cB_4aea-a2-m2-cB
50 4aea-a2-m1-cB 67 64 0.3667 0.3284 0.3438 0.013 4aea-a2-m1-cB_4aea-a2-m2-cB
51 6zfm-a1-m1-cD 71 64 0.3667 0.3099 0.3438 0.016 6zfm-a1-m1-cA_6zfm-a1-m1-cD
52 6zfm-a1-m1-cA 71 64 0.3667 0.3099 0.3438 0.016 6zfm-a1-m1-cA_6zfm-a1-m1-cD, 6zfm-a1-m1-cE_6zfm-a1-m1-cA
53 2ctx-a1-m2-cA 71 64 0.3667 0.3099 0.3438 0.016 2ctx-a1-m1-cA_2ctx-a1-m2-cA
54 2ctx-a1-m1-cA 71 64 0.3667 0.3099 0.3438 0.016 2ctx-a1-m1-cA_2ctx-a1-m2-cA
55 6zfm-a1-m1-cE 65 59 0.3500 0.3231 0.3559 0.017 6zfm-a1-m1-cE_6zfm-a1-m1-cA
56 4rud-a1-m1-cB 58 49 0.3000 0.3103 0.3673 1.1 4rud-a1-m1-cA_4rud-a1-m1-cB
57 4rud-a1-m1-cA 58 49 0.3000 0.3103 0.3673 1.1 4rud-a1-m1-cA_4rud-a1-m1-cB
58 2w1v-a1-m1-cB 274 25 0.1500 0.0328 0.3600 4.1 2w1v-a1-m1-cA_2w1v-a1-m1-cB
59 2w1v-a1-m1-cA 274 25 0.1500 0.0328 0.3600 4.1 2w1v-a1-m1-cA_2w1v-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600